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Report for CCDS45156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45156.1 Public Homo sapiens 14 SLC24A4 24 110 108 CCDS HistoryNCBI Gene:123041Re-query CCDS DB by CCDS ID:45156.1Re-query CCDS DB by GeneID:123041See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393265.6 ENSP00000376948.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393265.6Link to Ensembl Protein Viewer:ENSP00000376948.2Re-query CCDS DB by Nucleotide ID:ENST00000393265Re-query CCDS DB by Protein ID:ENSP00000376948
Original member Current member NCBI NM_153648.4 NP_705934.1 Accepted alive Link to Nucleotide Sequence:NM_153648.4Link to Protein Sequence:NP_705934.1Re-query CCDS DB by Nucleotide ID:NM_153648Re-query CCDS DB by Protein ID:NP_705934Link to BLAST:NP_705934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705934.1 558 Q8NFF2-2 558 100% 0 0

Chromosomal Locations for CCDS 45156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 92325930 92325978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92433912 92433988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92439335 92439409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92442089 92442173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92442713 92442816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92443400 92443474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92445317 92445342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92447371 92447424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92449074 92449216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92453900 92454069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92456404 92456608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92482680 92482846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92486666 92486780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92491665 92491777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92492175 92492240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92493476 92493628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGGCCCCAGTGAATGGGACACAGACAGCCAAGAACTGCACAGATCCTGCGATTCACGAGTTCCCCACAG
ATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCTGTATATGTT
CTATGCCTTGGCCATAGTGTGCGATGACTTCTTTGTTCCGTCTCTAGAGAAGATCTGTGAGAGACTCCAT
CTGAGCGAAGATGTGGCTGGAGCCACCTTCATGGCTGCAGGAAGCTCAACGCCAGAGCTGTTTGCGTCTG
TTATTGGGGTGTTCATCACCCATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTGCTGTGTTCAACAT
CCTGTGCATAATTGGAGTGTGCGGACTGTTTGCTGGCCAGGTGGTCCGTCTGACGTGGTGGGCCGTGTGC
CGAGACTCCGTGTACTACACCATCTCTGTCATCGTGCTCATCGTGTTCATATATGATGAACAAATTGTGT
GGTGGGAAGGCCTGGTGCTCATCATCTTGTATGTGTTTTATATTCTGATCATGAAGTACAATGTGAAGAT
GCAAGCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGCT
GGTAATGATTTCTATGACGGTAGCTATGATGACCCTTCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGC
CACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTCCAGCCCTCCCAAGTTCACCTT
CCCTGAAGCAGGCTTACGAATCATGATCACCAATAAGTTTGGACCCAGGACCCGACTACGGATGGCCAGC
AGGATCATCATTAATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA
ACGGGAGGCACGAGAACATTGAGAACGGGAATGTTCCTGTGGAAAACCCCGAAGACCCTCAGCAGAATCA
GGAGCAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTGGAGGCTGACTTCCTGTCCCCC
TTCTCCGTGCCGGAGGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTGGCCCCTCATCTTCCTCCTGT
GCGTCACCATTCCCAACTGCAGCAAGCCCCGCTGGGAGAAGTTCTTCATGGTCACCTTCATCACCGCCAC
GCTGTGGATCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGACTATTATCGGATACACACTTGGGATC
CCGGATGTCATCATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGCCTAA
TTGTGGCGAGACAAGGCCTTGGGGACATGGCAGTCTCCAACACCATAGGAAGCAACGTGTTTGACATCCT
GGTAGGACTTGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAATTATGGATCAACAGTGAAGATCAAC
AGCCGGGGGCTGGTCTATTCCGTGGTCCTGTTGCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCCACC
TAAACAAGTGGCGACTGGACCGGAAGCTGGGTGTCTACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTT
CTCCATAATGATAGAGTTTAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCGGGAAGACGATTAG

Translation (558 aa):
MAPVNGTQTAKNCTDPAIHEFPTDLFSNKERQHGAVLLHILGALYMFYALAIVCDDFFVPSLEKICERLH
LSEDVAGATFMAAGSSTPELFASVIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVRLTWWAVC
RDSVYYTISVIVLIVFIYDEQIVWWEGLVLIILYVFYILIMKYNVKMQAFFTVKQKSIANGNPVNSELEA
GNDFYDGSYDDPSVPLLGQVKEKPQYGKNPVVMVDEIMSSSPPKFTFPEAGLRIMITNKFGPRTRLRMAS
RIIINERQRLINSANGVSSKPLQNGRHENIENGNVPVENPEDPQQNQEQQPPPQPPPPEPEPVEADFLSP
FSVPEARGDKVKWVFTWPLIFLLCVTIPNCSKPRWEKFFMVTFITATLWIAVFSYIMVWLVTIIGYTLGI
PDVIMGITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGSTVKIN
SRGLVYSVVLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAIFLCFSIMIEFNVFTFVNLPMCREDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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