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Report for CCDS444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
444.1 Public Homo sapiens 1 BMP8B 24 110 108 CCDS HistoryNCBI Gene:656Re-query CCDS DB by CCDS ID:444.1Re-query CCDS DB by GeneID:656See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 444.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372827.8 ENSP00000361915.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372827.8Link to Ensembl Protein Viewer:ENSP00000361915.3Re-query CCDS DB by Nucleotide ID:ENST00000372827Re-query CCDS DB by Protein ID:ENSP00000361915
Original member Current member NCBI NM_001720.5 NP_001711.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001720.5Link to Protein Sequence:NP_001711.2Re-query CCDS DB by Nucleotide ID:NM_001720Re-query CCDS DB by Protein ID:NP_001711Link to BLAST:NP_001711.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001711.2 402 P34820-1 402 100% 0 0

Chromosomal Locations for CCDS 444.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 39760419 39760568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39763092 39763202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39763712 39763791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39764623 39764817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39774308 39774456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39774849 39775038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39788152 39788485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGACCGCGCTCCCCGGCCCGCTCTGGCTCCTGGGCCTGGCGCTATGCGCGCTGGGCGGGGGCGGCCCCG
GCCTGCGACCCCCGCCCGGCTGTCCCCAGCGACGTCTGGGCGCGCGCGAGCGCCGGGACGTGCAGCGCGA
GATCCTGGCGGTGCTCGGGCTGCCTGGGCGGCCCCGGCCCCGCGCGCCACCCGCCGCCTCCCGGCTGCCC
GCGTCCGCGCCGCTCTTCATGCTGGACCTGTACCACGCCATGGCCGGCGACGACGACGAGGACGGCGCGC
CCGCGGAGCGGCGCCTGGGCCGCGCCGACCTGGTCATGAGCTTCGTTAACATGGTGGAGCGAGACCGTGC
CCTGGGCCACCAGGAGCCCCATTGGAAGGAGTTCCGCTTTGACCTGACCCAGATCCCGGCTGGGGAGGCG
GTCACAGCTGCGGAGTTCCGGATTTACAAGGTGCCCAGCATCCACCTGCTCAACAGGACCCTCCACGTCA
GCATGTTCCAGGTGGTCCAGGAGCAGTCCAACAGGGAGTCTGACTTGTTCTTTTTGGATCTTCAGACGCT
CCGAGCTGGAGACGAGGGCTGGCTGGTGCTGGATGTCACAGCAGCCAGTGACTGCTGGTTGCTGAAGCGT
CACAAGGACCTGGGACTCCGCCTCTATGTGGAGACTGAGGACGGGCACAGCGTGGATCCTGGCCTGGCCG
GCCTGCTGGGTCAACGGGCCCCACGCTCCCAACAGCCTTTCGTGGTCACTTTCTTCAGGGCCAGTCCGAG
TCCCATCCGCACCCCTCGGGCAGTGAGGCCACTGAGGAGGAGGCAGCCGAAGAAAAGCAACGAGCTGCCG
CAGGCCAACCGACTCCCAGGGATCTTTGATGACGTCCACGGCTCCCACGGCCGGCAGGTCTGCCGTCGGC
ACGAGCTCTACGTCAGCTTCCAGGACCTCGGCTGGCTGGACTGGGTCATCGCTCCCCAAGGCTACTCGGC
CTATTACTGTGAGGGGGAGTGCTCCTTCCCACTGGACTCCTGCATGAATGCCACCAACCACGCCATCCTG
CAGTCCCTGGTGCACCTGATGATGCCAGACGCAGTCCCCAAGGCGTGCTGTGCACCCACCAAGCTGAGCG
CCACCTCTGTGCTCTACTATGACAGCAGCAACAATGTCATCCTGCGCAAGCACCGCAACATGGTGGTCAA
GGCCTGCGGCTGCCACTGA

Translation (402 aa):
MTALPGPLWLLGLALCALGGGGPGLRPPPGCPQRRLGARERRDVQREILAVLGLPGRPRPRAPPAASRLP
ASAPLFMLDLYHAMAGDDDEDGAPAERRLGRADLVMSFVNMVERDRALGHQEPHWKEFRFDLTQIPAGEA
VTAAEFRIYKVPSIHLLNRTLHVSMFQVVQEQSNRESDLFFLDLQTLRAGDEGWLVLDVTAASDCWLLKR
HKDLGLRLYVETEDGHSVDPGLAGLLGQRAPRSQQPFVVTFFRASPSPIRTPRAVRPLRRRQPKKSNELP
QANRLPGIFDDVHGSHGRQVCRRHELYVSFQDLGWLDWVIAPQGYSAYYCEGECSFPLDSCMNATNHAIL
QSLVHLMMPDAVPKACCAPTKLSATSVLYYDSSNNVILRKHRNMVVKACGCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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