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Report for CCDS21686.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21686.1 Public Mus musculus 7 Or2d2 23 108 98 CCDS HistoryNCBI Gene:258776Re-query CCDS DB by CCDS ID:21686.1Re-query CCDS DB by GeneID:258776See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21686.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076958.5 ENSMUSP00000076225.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076958.5Link to Ensembl Protein Viewer:ENSMUSP00000076225.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000076958Re-query CCDS DB by Protein ID:ENSMUSP00000076225
Original member Current member EBI ENSMUST00000214919.1 ENSMUSP00000150168.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214919.1Link to Ensembl Protein Viewer:ENSMUSP00000150168.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214919Re-query CCDS DB by Protein ID:ENSMUSP00000150168
Original member Current member NCBI NM_146780.2 NP_666991.1 Accepted alive Link to Nucleotide Sequence:NM_146780.2Link to Protein Sequence:NP_666991.1Re-query CCDS DB by Nucleotide ID:NM_146780Re-query CCDS DB by Protein ID:NP_666991Link to BLAST:NP_666991.1

Chromosomal Locations for CCDS 21686.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107128444 107129391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGATGCAGGCAAATCAGACACAGGTGACAGAATTTATTCTTCTGGGACTCTCTGATGACCCCCACACCC
AGAAGCTGCTATTCATCTTATTTCTGGGCATCTATATGGTCACTGTACTTGGAAACCTACTTCTCATGTT
CCTTGTTCGGGCTGACTCTCGGCTTCACACACCCATGTATTTTTTTCTGTGTAACTTGTCACTGGCTGAC
CTCTGCTTTTCTACCAACATTGTTCCACAGGCTCTCATCCATCTCCTTTCAAGGAAAAAGACTATTTCAT
TTAGACGCTGTGCAGCCCAGCTTCTGCTCTTTCTCATCTTTGGGTGTACACAATGTGCCCTTTTGGCTGT
GATGTCCTATGATCGGTATGTGGCTATCTGTAACCCTTTACATTACTCTAGCATCATGACATGGAGGGTG
TGTATCCAGCTGGCTACAGTGTCATGGACTAGTGGCATTTTAGTCTCTGTGGTGGACACCACTTTCACAC
TAAGACTTCCCTATCGAGGCAGCAACAGTATTGCTCACTTCTTTTGTGAGGCCCCTGCACTTTTGGCCCT
GGCTTCTACAGACACTCAAACTTCAGAGATGGCTATTTTCCTCATGGGGGTTGTGATTCTCCTTATACCT
GTCTCCCTAATTCTGGTGTCCTATGGCCATATCATAGTAACTGTTGTCAAGATGAAATCAGCTGCTGGGA
GGTTCAAGGCATTTTCTACCTGTGGCTCCCACCTCATGGTTGTCATCCTCTTTTATGGATCAGCGATTAT
CACCTACATGACCCCAAAGTCTTCCAAAGAACAGGAGAAACTGGTGTCTGTTTTCTATGCAATGGTGACA
CCTATGCTTAATCCCCTCATCTACAGCCTTAGGAACAAAGATGTAAAGGGAGCTTTGTGGAAAGTAGCCA
TGAAGAACTTCTCAAGCAGGCTTAGAATCACCCACTGA

Translation (315 aa):
MMQANQTQVTEFILLGLSDDPHTQKLLFILFLGIYMVTVLGNLLLMFLVRADSRLHTPMYFFLCNLSLAD
LCFSTNIVPQALIHLLSRKKTISFRRCAAQLLLFLIFGCTQCALLAVMSYDRYVAICNPLHYSSIMTWRV
CIQLATVSWTSGILVSVVDTTFTLRLPYRGSNSIAHFFCEAPALLALASTDTQTSEMAIFLMGVVILLIP
VSLILVSYGHIIVTVVKMKSAAGRFKAFSTCGSHLMVVILFYGSAIITYMTPKSSKEQEKLVSVFYAMVT
PMLNPLIYSLRNKDVKGALWKVAMKNFSSRLRITH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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