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Report for CCDS27558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27558.1 Public Mus musculus 15 Mapk15 23 108 98 CCDS HistoryNCBI Gene:332110Re-query CCDS DB by CCDS ID:27558.1Re-query CCDS DB by GeneID:332110See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27558.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089669.5 ENSMUSP00000087098.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089669.5Link to Ensembl Protein Viewer:ENSMUSP00000087098.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000089669Re-query CCDS DB by Protein ID:ENSMUSP00000087098
Original member NCBI NM_177922.2 NP_808590.1 Updated not alive Link to Nucleotide Sequence:NM_177922.2Link to Protein Sequence:NP_808590.1Re-query CCDS DB by Nucleotide ID:NM_177922Re-query CCDS DB by Protein ID:NP_808590
Current member NCBI NM_177922.3 NP_808590.1 Accepted alive Link to Nucleotide Sequence:NM_177922.3Link to Protein Sequence:NP_808590.1Re-query CCDS DB by Nucleotide ID:NM_177922Re-query CCDS DB by Protein ID:NP_808590Link to BLAST:NP_808590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808590.1 549 Q80Y86 549 100% 0 0

Chromosomal Locations for CCDS 27558.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75993860 75993928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75994845 75994943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75995072 75995101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75995234 75995324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75995827 75995957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75996041 75996204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75996375 75996514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75997111 75997168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75997570 75997707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75997828 75997933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75998059 75998263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75998371 75998474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75998550 75998678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75998779 75998964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1650 nt):
ATGTGTGCTGCCGAGGTGGACCGTCATGTAGCCCAGAGATACCTGATCAAGCGGAGGCTTGGGAAGGGGG
CCTATGGCATTGTGTGGAAGGCCATGGACCGGAGGACTGGCGAGGTTGTGGCCATCAAGAAAATCTTTGA
TGCCTTTAGGGACCAGATAGATGCTCAGAGGACCTTCCGTGAGATTATGCTTCTCAAGGAGTTTGGAGGC
CATCCCAACATCATCCGCCTGCTTGATGTAATCCCAGCGAAGAATGACAGGGATATTTACCTGGTGTTTG
AGTCCATGGACACCGACCTGAATGCAGTCATCCAGAAGGGCAGACTACTGAAGGACATCCACAAGCGGTG
CATCTTTTACCAGCTCCTGAGAGCCACCAAGTTTATCCATTCAGGGCGCGTCATCCATCGGGATCAGAAG
CCAGCCAATGTTCTACTGGATTCTGCTTGCCGGGTGAAACTCTGTGACTTTGGCCTGGCACGCTCCCTCG
GTGACCTCCCTGAGGGGCCTGGGGGTCAGGCCCTGACAGAGTATGTGGCCACACGCTGGTACCGAGCTCC
AGAGGTGCTTCTGTCTTCCCGATGGTATACCCCTGGGGTGGACATGTGGAGCCTGGGCTGCATATTAGGA
GAGATGCTTCGAGGGCAGCCACTGTTTCCCGGGACATCTACTTTCCACCAGCTGGAGCTGATCCTGAAGA
CCATCCCATTGCCTTCCATGGAGGAGCTCCAGGACCTTGGCTCAGACTACAGTGCTTTGATTCTGCAGAA
TCTTGGGTCCAGGCCACAGCAGACGCTGGACGCCCTCCTGCCGCCAGACACCCCCCCAGAAGCCCTGGAC
CTCCTCAAGCGACTCTTGGCGTTTGCTCCGGACAAGCGCCTTAGTGCAGAGCAGGCGCTGCAACACCCCT
ACGTGCAGAGATTCCATTGCCCCGACCGCGAGTGGGCACGGGAGTCCGACGTGCGGCTCCCGGTGCACGA
AGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGGAAC
AGCCGCAGCCCTCGAGAGGAAGGCCTGGGGGTTGTGGCCTCGCGGGCTGAGCTCAGGGCTTCCCCGGCCC
GGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCCAGCGCGAAAACGCGGACC
CAAACCTCCGCGTAGCCCTGGTCATGATCCTGAGCATGTGGAAGTTCGCAGGCAGAGCTCAGACCCCCTG
TTCCAACTTCCGCCGCCAGGAAGGGGGGAAAGGCCCCCAGGGGCCACAGGGCAGCCACCCTCGGCACCCT
CAGGGGTGAAGACTCAAGTGAGGGCGATGGCGCCGTCCCTGACTTCACAGGCAGAGGCTCAGGCGGCCAA
TCAGGCTCTGATCCGCAGTGATCCGGCCCGGGGCGGTGGGCCGAGGGCGGTCGGCGCGCGACGGGTCCCT
TCCCGCCTGCCCCGGGAGGCCCCGGAACCCCGACCCGGCCGAAGGATGTTTGGCATCTCGGTCTCGCAGG
GGGCCCAGGGCGCAGCCAGAGCTGCGCTTGGCGGCTACTCCCAGGCCTACGGGACCGTGTGCCGCTCGGC
GCTGGGCCGCCTGCCCCTGCTCCCCGGACCGCGTGCGTGA

Translation (549 aa):
MCAAEVDRHVAQRYLIKRRLGKGAYGIVWKAMDRRTGEVVAIKKIFDAFRDQIDAQRTFREIMLLKEFGG
HPNIIRLLDVIPAKNDRDIYLVFESMDTDLNAVIQKGRLLKDIHKRCIFYQLLRATKFIHSGRVIHRDQK
PANVLLDSACRVKLCDFGLARSLGDLPEGPGGQALTEYVATRWYRAPEVLLSSRWYTPGVDMWSLGCILG
EMLRGQPLFPGTSTFHQLELILKTIPLPSMEELQDLGSDYSALILQNLGSRPQQTLDALLPPDTPPEALD
LLKRLLAFAPDKRLSAEQALQHPYVQRFHCPDREWARESDVRLPVHEGDQLSAPEYRKRLYQIILEQSGN
SRSPREEGLGVVASRAELRASPARTQSLKSGVLPQVPAETPARKRGPKPPRSPGHDPEHVEVRRQSSDPL
FQLPPPGRGERPPGATGQPPSAPSGVKTQVRAMAPSLTSQAEAQAANQALIRSDPARGGGPRAVGARRVP
SRLPREAPEPRPGRRMFGISVSQGAQGAARAALGGYSQAYGTVCRSALGRLPLLPGPRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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