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Report for CCDS10652.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10652.1 Public Homo sapiens 16 C16orf54 24 110 108 CCDS HistoryNCBI Gene:283897Re-query CCDS DB by CCDS ID:10652.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10652.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329410.4 ENSP00000327506.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329410.4Link to Ensembl Protein Viewer:ENSP00000327506.3Re-query CCDS DB by Nucleotide ID:ENST00000329410Re-query CCDS DB by Protein ID:ENSP00000327506
Original member Current member NCBI NM_175900.4 NP_787096.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175900.4Link to Protein Sequence:NP_787096.2Re-query CCDS DB by Nucleotide ID:NM_175900Re-query CCDS DB by Protein ID:NP_787096Link to BLAST:NP_787096.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787096.2 224 Q6UWD8 224 100% 0 0

Chromosomal Locations for CCDS 10652.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29744277 29744951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGCCGTTGACTCCAGAGCCGCCCTCTGGGCGCGTGGAGGGGCCCCCCGCATGGGAAGCAGCCCCATGGC
CCTCACTGCCCTGTGGGCCCTGCATCCCCATCATGCTGGTCCTGGCCACCCTGGCTGCGCTCTTCATCCT
CACCACCGCTGTGTTGGCTGAACGCCTGTTCCGCCGTGCTCTCCGCCCAGACCCCAGCCACCGTGCACCC
ACCCTGGTGTGGCGCCCAGGAGGAGAGCTGTGGATTGAGCCCATGGGCACCGCCCGAGAGCGCTCTGAGG
ACTGGTATGGCTCTGCGGTCCCCCTGCTGACAGATCGGGCCCCTGAGCCTCCCACCCAGGTGGGCACTTT
GGAGGCCCGAGCAACAGCCCCACCTGCCCCCTCAGCCCCAAATTCTGCTCCCAGCAACTTGGGCCCCCAG
ACCGTACTGGAGGTCCCAGCCCGGAGCACCTTCTGGGGGCCCCAGCCCTGGGAGGGGAGGCCCCCCGCCA
CAGGCCTGGTGAGCTGGGCTGAACCCGAGCAGAGGCCAGAGGCCAGCGTCCAGTTTGGGAGCCCCCAGGC
CAGGAGGCAGCGGCCAGGGAGCCCGGATCCTGAGTGGGGCCTCCAGCCACGGGTCACCTTGGAGCAGATC
TCAGCTTTCTGGAAGCGTGAAGGCCGGACCAGTGTGGGGTTCTGA

Translation (224 aa):
MPLTPEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPDPSHRAP
TLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQ
TVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPRVTLEQI
SAFWKREGRTSVGF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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