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Report for CCDS22765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22765.1 Public Mus musculus 8 Nup133 23 108 98 CCDS HistoryNCBI Gene:234865Re-query CCDS DB by CCDS ID:22765.1Re-query CCDS DB by GeneID:234865See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044795.7 ENSMUSP00000048084.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044795.7Link to Ensembl Protein Viewer:ENSMUSP00000048084.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044795Re-query CCDS DB by Protein ID:ENSMUSP00000048084
Original member NCBI NM_172288.2 NP_758492.2 Updated not alive Link to Nucleotide Sequence:NM_172288.2Link to Protein Sequence:NP_758492.2Re-query CCDS DB by Nucleotide ID:NM_172288Re-query CCDS DB by Protein ID:NP_758492
Current member NCBI NM_172288.3 NP_758492.2 Accepted alive Link to Nucleotide Sequence:NM_172288.3Link to Protein Sequence:NP_758492.2Re-query CCDS DB by Nucleotide ID:NM_172288Re-query CCDS DB by Protein ID:NP_758492Link to BLAST:NP_758492.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758492.2 1155 Q8R0G9 1155 100% 0 0

Chromosomal Locations for CCDS 22765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123899374 123899510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123902599 123902687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123904552 123904616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123906214 123906294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123907756 123907874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123909884 123910019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123911749 123911907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123914498 123914631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123915175 123915426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123916284 123916383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123917430 123917552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123918772 123918996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123920848 123920942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123922349 123922512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123927130 123927221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123929244 123929401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123930856 123931003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123933367 123933514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123936087 123936157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123936831 123936986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123938135 123938305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123939040 123939174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123941035 123941142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123944255 123944358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123946493 123946611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123948998 123949176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3468 nt):
ATGTTTCCGAGCGTCTCCTCTCCGCGAACCCCAGGGCCGGGGACCCGACGCGGTCCGCTAGTCGGGATCG
GGCCCACGTCCACGCCTAGAGCGAGCAGGAGGGGTCTGTCTCTGGGATCTGCGGTTAACTCGCCCGTGCT
GTTCTCGCCCGCAGGCCGGCGCAGCTCGGTGAGCTCACGAGGAACGCCTACTCGGATATTCCCCCACCAT
TCCATATCAGAGTCTGTGAACTACGATGTGAGAGTGTTTGGATCATCTCTCCCTGTTAAGATCATGGAAG
CCCTGACAATGGCTGAGGCTGACGAGCAGCTTTCTGTCCATGTCGATGAAGGTGGGTGGGCCTGCCTGGT
ATGCACGGAGAAGCTCCTCATTTGGAAGATTGCTGTGTCGCCTGTCACTAAGTTGTCTGTCTGCAAAGAA
CTCCAGCTGCCCCCTAGCGATTTCCACGGGAGCGCTGATTTGGTGGCCCTGTCTTATGCTGCGACCTCAG
GTGAAGTCCATTCTGTGCAGGCTGTTTCTGTCATGGTTGCTACCAAAGAGGGGTCCATCCGCTATTGGCC
CAGCCTCGCCAGGGAAGACACCTACTCAGACACCTGTGTGGATTTGGGAGGCGAGAAGATGTGCAGGTTC
CTGACAGCAGTGCAGGGAGGAAGTTTCATCCTGTCCTCCGTGGGGAGCCAGTTGGTTCGATTGATTCCTG
AAAGCTCAGGAAAGATTCACCAGCATGTCCTGCCCCAGGGCCAAGGCATGCTCTCAGGGATTGGCCGGAG
GGTTTCTTCCCTTTTCGGGATTCTGTCCCCTACTAGTGACCTCATGCTGGCCAGTGTTCTGTGGGACAGA
GGAGGATCAAGTTTCTACACCCTGACGAGTTCAAACATCAGCAAATGGGAACTGGACGATTCTTCAGAGA
AGCAGGTTCACAGCTGGGATGTGCACAGGACCCTGAAGGAGAGCATCACCGATGCTGTTTGGGGGTCTGA
AAGTAACTATGAAGCTATTAAAGAAGGGGTCAACATTCAGTACTTGGACTTGAAACAAAACTGCGATGGG
CTCCTGATTTTGGCAGCAGCGTGGCACCTGGGAGACAGCCCCTGTCTTGTCTATTACTCTGTGATCACGG
TGGAAGACAATGGTAACCAGATGTCAGATGCAGTCACCGTAGAAGTGACTCAGTATAACCCCCCTTTCCA
GTCTGAAGACCTGATCGCATGTCGATTGATGGTGCCAAACTTTTCAAGCCAGATGACCTATCTTTACATG
GAGAATGCTGTCTTTGTGTGCTCCACAGGCACTGGGAAGTTTTCTCTTCCTCAGGAAAAGATTGTCTTTG
ATACACAAGGGGATGGCATTTTGGGCGCTGGCTCCTGTGCTGGTGTTCCTATCCTTTTCTCTAGGAATAG
TGGTCTGGTGTCTGTCACTCCAAGGGAAAATGTATCCCTGTTAGCAGAAGACCTGGAAGAGTCTTTGACC
TCCTCAGTTGGTGGACGGGGCAGTGAGAGTATGGTTTTTGAGACCACCACAAAAAACGAAACTGTAGCCC
ATGAAGACAAGACAAAACTGCTTAAGGCTGCATTTCTACAGTACTGCAGGAAAGATTTGGGCCGCGCTCA
GATAATGGCTGATGAGCTGTTTTCCTCTCACACGGATTTGGATTCGGACCCTGAGCTAGACAAGGCCGTG
ACTCAGATCAGTGTGGACCTGATTGATGACTACCCGGCCTCAGACCCACGCTGGGCAGAGTCTGTCCCCC
AGGAGGCCCCTGGGCTGAGCAACACCTCACTGATCATTTTGCACCAGCTGGAGGACAAGATGAAAGCTCA
CTGCCTCTTGGTGGACTTCCTTCACCAAGTCGGCTTGTTTAGACGTTTGAGCTCCTATCCAATCAGAGGG
ACACCCATGTCCACCCGACTGCTACTCTGTGAACATGCAGAAAAGCTGTCAGCTGCCATCACACTAAAAA
ACCACCACTCTCGACTGCCAGACCTGGTGAACTCAGCTATCCTGCTCGCCCTGAACAAGAGGGAGTGTGA
GGTTCCCAACAGCCTGACTCCTGCCGATGTCTTCTTTCGAGAGGTGTCCCAGGTGGACACTATCTGTGAG
TGCCTCCTGGAGCATGAGGAACAAGTCCTGCGTGAAGTTGCGTTGGTCTCTCAGGAGTGGGCAGAGGTGG
CGATCGACGTCAATACTGTCCTCAAGGACATGCTACAGGCTGCCACTCACTACCGCCTAAACAAAAGCTC
TATGTACAGTCAGGAAGAGGTACTAGGGAAGGAGCCAGAGTATGTGCCATGGACAGCCACAAGTGGTCCA
TCCGGTATCCGCACAGCAGTCATGCGCCAGCACGGGATCATCCTGAAGATGGTATACCCTCAGGCTGACA
GCAAACTTCGGAACGTTGTCATGGAGCAGCTTGTGGCACTAATTGACTGCTTCCTGGACAGCTACGTTTC
CCAGCTGAAGTCGCTAGAGAAATCCAGTGACCAAGAACGATACAGCAGTCTGGAAGTGGAGTACCTGCAG
AAAAGATCCGAGCTGCTCTCGCCCCTTCTCACACTAGGTCAGTACCCATGGGCAGCTTCTCTGGCAGAGA
AGTATTGTGACTTTGATATCCTGGTTCAGATGTGTGAACAGACAGACAACCAAGCCCGACTCCAGCGCTA
CATGACCCAGTTTGCTGACCAGAATTTTTCAGATTTTCTCTTTCGTTGGTACCTGGAAAAAGGAAAGCGG
GGAAAATTGCTGTCTCAGCCCATTTCTCAGCATGGACAGTTGGCAAATTTTTTGCAAGCCCATGAGCATC
TCAGCTGGTTACATGAAATTAATAGTCAGGAGTTAGAGAAGGCTCATACAACACTGCTAGGTTTGGCAAA
TATGGAAACTCGTTACTTTGCAAAGAAAAAAACCCTTCTTGGCTTGAGTAAACTGGCAGCTTTAGCTTCA
GACATTTCAGAGGACAGGCTGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGCGCTTCCTGCTACACC
AGGAGACCCTGCCAGAGCAGCTGCTGACCGAGAGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACCGC
ACCACAACTCATCAGTCTGTATATCTGTGACGAAAACAGAAGAGCCAATGAGTATGATTTCAAGAAAGCC
TTGGACTTACTGGAGTACATTGATGAGGAAGAAGATGTGAGCATTGATGACCTGAAGCTGGAGATTCTGT
GCAGAGCACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGAAGTGTCTAAAGA
CAGTGTGTTTGTAAAGATCTTGCAGAAACTTATAAAAGACGGCATCCAGCTCAGCGAGTACTTGCCAGAG
GTGACGGACCTACTGCGAGCAGAGCAGCTGGGAAGCCTCAAGTCCAACTCTTACTTTGAGTTTGTTCTGA
AAGCAAATTATGAGTATTATGTCCAAGGACAGATGTGA

Translation (1155 aa):
MFPSVSSPRTPGPGTRRGPLVGIGPTSTPRASRRGLSLGSAVNSPVLFSPAGRRSSVSSRGTPTRIFPHH
SISESVNYDVRVFGSSLPVKIMEALTMAEADEQLSVHVDEGGWACLVCTEKLLIWKIAVSPVTKLSVCKE
LQLPPSDFHGSADLVALSYAATSGEVHSVQAVSVMVATKEGSIRYWPSLAREDTYSDTCVDLGGEKMCRF
LTAVQGGSFILSSVGSQLVRLIPESSGKIHQHVLPQGQGMLSGIGRRVSSLFGILSPTSDLMLASVLWDR
GGSSFYTLTSSNISKWELDDSSEKQVHSWDVHRTLKESITDAVWGSESNYEAIKEGVNIQYLDLKQNCDG
LLILAAAWHLGDSPCLVYYSVITVEDNGNQMSDAVTVEVTQYNPPFQSEDLIACRLMVPNFSSQMTYLYM
ENAVFVCSTGTGKFSLPQEKIVFDTQGDGILGAGSCAGVPILFSRNSGLVSVTPRENVSLLAEDLEESLT
SSVGGRGSESMVFETTTKNETVAHEDKTKLLKAAFLQYCRKDLGRAQIMADELFSSHTDLDSDPELDKAV
TQISVDLIDDYPASDPRWAESVPQEAPGLSNTSLIILHQLEDKMKAHCLLVDFLHQVGLFRRLSSYPIRG
TPMSTRLLLCEHAEKLSAAITLKNHHSRLPDLVNSAILLALNKRECEVPNSLTPADVFFREVSQVDTICE
CLLEHEEQVLREVALVSQEWAEVAIDVNTVLKDMLQAATHYRLNKSSMYSQEEVLGKEPEYVPWTATSGP
SGIRTAVMRQHGIILKMVYPQADSKLRNVVMEQLVALIDCFLDSYVSQLKSLEKSSDQERYSSLEVEYLQ
KRSELLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQARLQRYMTQFADQNFSDFLFRWYLEKGKR
GKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHTTLLGLANMETRYFAKKKTLLGLSKLAALAS
DISEDRLQEKIEAMAEQERFLLHQETLPEQLLTERQLSLSAMPVLTAPQLISLYICDENRRANEYDFKKA
LDLLEYIDEEEDVSIDDLKLEILCRALQRDDWSGSDGKDDPIEVSKDSVFVKILQKLIKDGIQLSEYLPE
VTDLLRAEQLGSLKSNSYFEFVLKANYEYYVQGQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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