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Report for CCDS86439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86439.1 Public Homo sapiens 15 GOLGA8G 24 110 108 CCDS HistoryNCBI Gene:283768Re-query CCDS DB by CCDS ID:86439.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000525590.3 ENSP00000458130.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000525590.3Link to Ensembl Protein Viewer:ENSP00000458130.1Re-query CCDS DB by Nucleotide ID:ENST00000525590Re-query CCDS DB by Protein ID:ENSP00000458130
Original member Current member NCBI NM_001350919.3 NP_001337848.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001350919.3Link to Protein Sequence:NP_001337848.1Re-query CCDS DB by Nucleotide ID:NM_001350919Re-query CCDS DB by Protein ID:NP_001337848Link to BLAST:NP_001337848.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001337848.1 648 P0DX53 648 100% 0 0

Chromosomal Locations for CCDS 86439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 28522573 28522757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28522843 28522995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28523085 28523185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28523268 28523368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28523943 28524034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28524472 28524547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28525919 28525987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28526255 28526511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28526902 28526989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28527185 28527292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28527399 28527488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28528508 28528617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28528713 28528797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28528886 28528933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28529207 28529245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28530100 28530180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28530364 28530423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28531009 28531128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 28532826 28532909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGTGGCCCCAAGCCCGCCTCCCTCCCCACCCTGCGATGGCAGAAGAAACTCGACAAAGTAAATTGGCAG
CAGCCAAGAGAAAGTTAAAAGAATATTGGCAGAGAAACAGCCCTGGTGTTCCAGCAGGAGCCAAGAGGAA
CAGGAAAACAAATGGCAGCATCCATGAGACAGCCACTTCTGGTGGTTGCCACTCACCTGGAGATTCAGCA
ACAGGTATCCACGGGGAGAGCCCTACATCATCTGCTACCCTGAAGGATCTGGAGAGCCCGTGCCAAGAAC
TAGCAGTAGTCCCAGACTCGAGGTCCGTAAAAGTCAGTCAACTGAAGAACACCATCAAATCTTTGAAACA
ACAGAATAAACAAGTGGAACATCAGCTGGAAGAAGAAAAGAAAGCAAACAACGAGAAACAGAAAGCCGAA
AGGGAGCTAGAGGTTCAAATCCAGAGATTGAACATACAGAAAGGGAAACTAAATACGGACCTGTACCACA
CGAAACGTTCTCTCAGATACTTTGAAGAAGAGTCCAAGGATCTGGCCGTCCGTCTGCAACATTCATTGCA
GCGTAAAGGAGAGTTAGAGCGGGCTCTCTCTGCTGTCACCGCCACACAGAAGAAGAAGGCGGAGAGGCAG
TTCTCCAGCCGCAGTAAAGCACGTATGGAGTGGAAGTTAGAGCAGTCCATGCGGGAGCAGGCACTGCTGA
AAGCGCAGCTGACACAGTTGAAGGAGTCACTTAAAGAAGTCCAGCTAGAGAGGGATGAATATGCTGAACA
TCTAAAAGGAGAGAGGGCCCGGTGGCAGCAGAGGATGAGAAAAATGTCGCAGGAGGTTTGCTCGTTGAAG
AAGGAGAAGAAGCATGATAAATATCGGGTAGAGAAGCTGGAGAGGAGCTTGTCCAAACTCAAACACCAGA
TGGCTGAACCTCTGCCCCCGGAGCCCCCAGCAGTGCCCTCTGAGGTGGAGCTGCAGCACCTGAGGAAGGA
ACTAGAGAGAGTGGCAGGAGAGCTCCAGGCCCAGGTGGAGTACAATCAGCGCATAAGTCTCCTGAATGAG
GGGCAAAAGGAGAGGCTTCGGGAGCAGGAGGAGAGGCTTCAGGAGCAGCAGGAGAGGCTTCCAGAGCAGG
AGGAGAGGCTTCAGCAGCTGGCCGAGCCACAGAACAGCTTCAAGGAGCTGAACAATGAGAACAAGAGCGT
ACTACAGTTGGAGCAGCAAGTAAAGGAGCTGCAGGAGAAGCTAGGCAAGGAGCGTCTGGAAGCTGCGAGC
CAGCAGAAACAGCAGCTAACGGCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGAGATGGAGGAGGAC
ATCTGGACAGTGAGGGGGAGGAGGCACCTCGGCCCATTCCTAGCATCCCACAGGACCTGGAGAGCAGGGA
GGCCATGAGCGGCTTTATGGACCACCTGGAGGAGAAGGCAGACCTGAGTGAGCTGGTGGAGAAAGAAGAA
CTTGGATTCTTCCAGTACTACAGAGAGAGATGCCATCAGAAAGTTTATCACCCTATAACAAAGCCAGGGG
GCAGTGCCAAAGATGCAGCACCGGGAGGAGGACACCATCAGGCTGGCCCTGGACAGGGAGGAGATGAAGG
TGAAGCTGCTGGAGCTGCAGGAGATGGTGTTGCAGCTGGTGGCGACTACAAGGGACACAGCAAATTCTTG
GTGACTGCCCAGAACCCTGCTCATGAGCCCAGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGGGGCTGCCC
ACAAGCATGGTGATCTTTGTGAGGTGAGCCTCACTGACAGCGTGGAGCCTGTGCAAGGAGAGGCCAGGGA
GGGTTCTCCCCACGACAACCCTACTGCACAGCCGATCGTGCAGGACCACCAGGAGCACCCAGGCTTGGGC
AGCAACTGCTGTGTGCCATTCTTTTGCTGGGCTTGGCTGCCAAGAAGAAGGAGATAA

Translation (648 aa):
MWPQARLPPHPAMAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSPGDSA
TGIHGESPTSSATLKDLESPCQELAVVPDSRSVKVSQLKNTIKSLKQQNKQVEHQLEEEKKANNEKQKAE
RELEVQIQRLNIQKGKLNTDLYHTKRSLRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERQ
FSSRSKARMEWKLEQSMREQALLKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLK
KEKKHDKYRVEKLERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGELQAQVEYNQRISLLNE
GQKERLREQEERLQEQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEKLGKERLEAAS
QQKQQLTAQLSLMALPGEGDGGGHLDSEGEEAPRPIPSIPQDLESREAMSGFMDHLEEKADLSELVEKEE
LGFFQYYRERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAAGGDYKGHSKFL
VTAQNPAHEPSPGAPAPQELGAAHKHGDLCEVSLTDSVEPVQGEAREGSPHDNPTAQPIVQDHQEHPGLG
SNCCVPFFCWAWLPRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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