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Report for CCDS31911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31911.1 Public Homo sapiens 12 GATC 24 110 108 CCDS HistoryNCBI Gene:283459Re-query CCDS DB by CCDS ID:31911.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000551765.6 ENSP00000446872.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000551765.6Link to Ensembl Protein Viewer:ENSP00000446872.1Re-query CCDS DB by Nucleotide ID:ENST00000551765Re-query CCDS DB by Protein ID:ENSP00000446872
Original member Current member NCBI NM_176818.3 NP_789788.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176818.3Link to Protein Sequence:NP_789788.1Re-query CCDS DB by Nucleotide ID:NM_176818Re-query CCDS DB by Protein ID:NP_789788Link to BLAST:NP_789788.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789788.1 136 O43716 136 100% 0 0

Chromosomal Locations for CCDS 31911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120446481 120446561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120446657 120446829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120457076 120457179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120459907 120459959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (411 nt):
ATGTGGTCGCGGTTGGTGTGGCTGGGCCTTCGGGCCCCTCTGGGCGGGCGCCAGGGCTTCACCTCCAAGG
CGGATCCTCAGGGCAGTGGCCGGATCACGGCTGCGGTGATCGAGCACCTGGAGCGTCTAGCGCTTGTGGA
CTTCGGCAGCCGCGAGGCAGTGGCGCGACTGGAGAAAGCTATCGCCTTCGCCGACCGGCTACGCGCCGTG
GACACAGACGGGGTGGAGCCCATGGAATCGGTCCTGGAGGACAGATGTCTATACCTGAGATCCGACAATG
TGGTAGAAGGCAACTGTGCTGATGAATTACTACAAAACTCCCATCGCGTCGTGGAGGAGTACTTTGTGGC
CCCCCCAGGTAATATCTCTTTGCCAAAGCTGGATGAACAAGAGCCATTCCCACACAGCTGA

Translation (136 aa):
MWSRLVWLGLRAPLGGRQGFTSKADPQGSGRITAAVIEHLERLALVDFGSREAVARLEKAIAFADRLRAV
DTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNISLPKLDEQEPFPHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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