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Report for CCDS36272.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36272.1 Public Mus musculus 11 Dynll2 23 108 98 CCDS HistoryNCBI Gene:68097Re-query CCDS DB by CCDS ID:36272.1Re-query CCDS DB by GeneID:68097See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36272.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020775.8 ENSMUSP00000020775.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020775.8Link to Ensembl Protein Viewer:ENSMUSP00000020775.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000020775Re-query CCDS DB by Protein ID:ENSMUSP00000020775
Original member Current member EBI ENSMUST00000107923.9 ENSMUSP00000103556.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107923.9Link to Ensembl Protein Viewer:ENSMUSP00000103556.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000107923Re-query CCDS DB by Protein ID:ENSMUSP00000103556
Original member Current member EBI ENSMUST00000178105.2 ENSMUSP00000136241.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178105.2Link to Ensembl Protein Viewer:ENSMUSP00000136241.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178105Re-query CCDS DB by Protein ID:ENSMUSP00000136241
Original member Current member NCBI NM_001168471.1 NP_001161943.1 Accepted alive Link to Nucleotide Sequence:NM_001168471.1Link to Protein Sequence:NP_001161943.1Re-query CCDS DB by Nucleotide ID:NM_001168471Re-query CCDS DB by Protein ID:NP_001161943Link to BLAST:NP_001161943.1
Original member Current member NCBI NM_001168472.1 NP_001161944.1 Accepted alive Link to Nucleotide Sequence:NM_001168472.1Link to Protein Sequence:NP_001161944.1Re-query CCDS DB by Nucleotide ID:NM_001168472Re-query CCDS DB by Protein ID:NP_001161944Link to BLAST:NP_001161944.1
Original member Current member NCBI NM_026556.4 NP_080832.1 Accepted alive Link to Nucleotide Sequence:NM_026556.4Link to Protein Sequence:NP_080832.1Re-query CCDS DB by Nucleotide ID:NM_026556Re-query CCDS DB by Protein ID:NP_080832Link to BLAST:NP_080832.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161943.1 89 Q9D0M5 89 100% 0 0
NP_001161944.1 89 Q9D0M5 89 100% 0 0
NP_080832.1 89 Q9D0M5 89 100% 0 0

Chromosomal Locations for CCDS 36272.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 87981433 87981570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 87983872 87984003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (270 nt):
ATGTCTGACCGGAAGGCAGTGATCAAGAACGCAGACATGTCTGAGGACATGCAACAGGATGCCGTTGACT
GTGCCACACAGGCCATGGAGAAGTACAACATAGAGAAGGACATTGCTGCCTATATCAAGAAGGAATTTGA
CAAGAAATATAACCCTACCTGGCATTGTATCGTGGGCCGGAATTTTGGCAGCTATGTCACACACGAGACA
AAGCACTTCATCTATTTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAGTCGGGCTAG

Translation (89 aa):
MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET
KHFIYFYLGQVAILLFKSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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