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Report for CCDS26910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26910.1 Public Mus musculus 14 Bap1 23 108 98 CCDS HistoryNCBI Gene:104416Re-query CCDS DB by CCDS ID:26910.1Re-query CCDS DB by GeneID:104416See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26910.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022458.10 ENSMUSP00000022458.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022458.10Link to Ensembl Protein Viewer:ENSMUSP00000022458.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022458Re-query CCDS DB by Protein ID:ENSMUSP00000022458
Original member Current member NCBI NM_027088.2 NP_081364.1 Accepted alive Link to Nucleotide Sequence:NM_027088.2Link to Protein Sequence:NP_081364.1Re-query CCDS DB by Nucleotide ID:NM_027088Re-query CCDS DB by Protein ID:NP_081364Link to BLAST:NP_081364.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081364.1 728 Q99PU7 728 100% 0 0

Chromosomal Locations for CCDS 26910.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 31251618 31251654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31251750 31251779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31251900 31251954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31252928 31253060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31253456 31253575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31254033 31254094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31254167 31254309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31254561 31254639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31255086 31255209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31255513 31255660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31256111 31256295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31256661 31256791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31257289 31257767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31257881 31258041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31258284 31258376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31258458 31258530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31258706 31258839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2187 nt):
ATGAATAAGGGCTGGCTGGAGCTGGAGAGTGACCCAGGCCTCTTCACCCTCCTGGTGGAAGATTTCGGTG
TCAAAGGGGTGCAAGTGGAGGAGATCTATGACCTTCAGAGTAAATGCCAGGGGCCTGTGTATGGATTTAT
CTTCCTGTTCAAATGGATCGAAGAGCGCAGGTCCCGCCGCAAGGTTTCTACGTTGGTGGATGACACGTCT
GTGATTGATGATGATATTGTGAATAACATGTTCTTTGCTCACCAGCTGATTCCCAACTCTTGTGCCACTC
ACGCCTTGCTAAGCGTGCTTCTGAACTGCAGCAATGTGGATCTGGGGCCCACGCTGAGCCGAATGAAGGA
TTTCACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCA
CATAATAGCCATGCCAGGCCAGAACCACGTCACCTTCCTGAGAAACAGAATGGCCTCAGTGCAGTGCGGA
CCATGGAGGCGTTTCATTTTGTCAGCTATGTGCCTATCACAGGGAGGCTCTTTGAATTGGATGGATTGAA
AGTCTACCCAATTGATCATGGGCCCTGGGGAGAGGACGAGGAGTGGACAGATAAAGCTCGAAGGGTCATC
ATGGAGCGAATCGGTCTTGCTACTGCAGGGGAGCCCTATCATGACATTCGCTTCAACCTGATGGCAGTGG
TGCCTGACCGCAGGATTAAGTATGAGACCAGGCTACATGTACTGAAGGTGAACCGACAAACAGTCCTGGA
GGCCCTGCAGCAGCTGATTAGAGTAACCCAGCCGGAGCTGATTCAGACCCACAAATCTCAAGAGTCACAG
CTGCCTGAGGAGAGCAAGCCAGCCAGCAGCAAGTCCCCCCTTGGACTGGAGGCAGGCAGAACCCCAGTGG
CCTCTGAGTGCACTCAGACAGATGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAG
TCCTCCCAGCAAATGTAAGCTGGTGGTGAAGCCTCCAGGGAGCAGCCTCAATGGGGTTCCCCCAAACCCT
GCCCCTATTGTCCAGCGGCTGCCAGCCTTCCTAGACAATCACAATTATGCCAAATCCCCTATGCAGGAGG
AGGAAGACCTGGCGGCAGGAGTGGGTCGCAGCCGCGTTCCCGTCCGAGCGCCCCAGCAGTACTCTGAAGA
CGAGGATGACTACGAGGATGAGGACGAGGACGTGCAGAACACCAACCCTGCCATCAGATACAAGCGGAAG
GGGACAGGGAAGCCAGGATCGTTGAGCAATTCTTCAGATGGGCAGCTGTCAGTGCTGCAGCCCAACACCA
TCAATGTCTTAACTGAGAAGCTTCAAGAGTCTCAGAAAGACCTTTCAGTTCCTCTGTCCATCAAGACTAG
CAGTGGGGCTGGGAGTCCAGCTGTGGCTGTGCCCACACACTCGCAACCTTCACCCACCCCTAGCAATGAG
AGCACGGACACAGCCTCTGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCCATCCGCTCGGCCA
ACCCAACACGGCCCTCTAGCCCTGTCACCTCTCACATCTCCAAGGTGCTTTTTGGAGAAGATGACAGCCT
ACTTCGTGTTGACTGCATACGCTACAACCGTGCTGTCCGTGACCTGGGTCCTGTCATTAGCACGGGCCTG
CTGCACCTTGCTGAAGATGGTGTACTGAGTCCCCTGGCACTCACAGAGGGTGGGAAGGGTTCCTCACCTT
CTACCAGATCAAGCCAAGGCAGCCAGGGGTCCAGTGGCCTAGAGGAGAAGGAGGTGGTGGAAGTCACAGA
GAGCAGAGACAAGCCTGGGCTGAACAGGTCCAGTGAGCCCTTGAGTGGAGAGAAGTACTCACCCAAGGAG
CTGCTAGCACTGCTAAAGTGTGTAGAAGCCGAGATTGCAAACTATGAGGCCTGTCTCAAGGAGGAGGTGG
AGAAAAGGAAGAAGTTCAAGATTGATGACCAGCGAAGGACCCACAACTATGACGAGTTTATCTGTACCTT
CATATCCATGCTGGCTCAGGAAGGAATGCTGGCCAACCTAGTGGAACAGAACATCTCAGTGCGCCGGCGC
CAAGGGGTCAGCATTGGGCGGCTTCACAAGCAGCGGAAGCCTGACCGGCGGAAACGCTCTCGCCCCTACA
AGGCCAAACGCCAGTGA

Translation (728 aa):
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTS
VIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA
HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVI
MERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQ
LPEESKPASSKSPLGLEAGRTPVASECTQTDGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPPNP
APIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRAPQQYSEDEDDYEDEDEDVQNTNPAIRYKRK
GTGKPGSLSNSSDGQLSVLQPNTINVLTEKLQESQKDLSVPLSIKTSSGAGSPAVAVPTHSQPSPTPSNE
STDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGL
LHLAEDGVLSPLALTEGGKGSSPSTRSSQGSQGSSGLEEKEVVEVTESRDKPGLNRSSEPLSGEKYSPKE
LLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRR
QGVSIGRLHKQRKPDRRKRSRPYKAKRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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