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Report for CCDS48362.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48362.1 Public Mus musculus 1 Kiss1 23 108 98 CCDS HistoryNCBI Gene:280287Re-query CCDS DB by CCDS ID:48362.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48362.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000007433.4 ENSMUSP00000007433.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000007433.4Link to Ensembl Protein Viewer:ENSMUSP00000007433.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000007433Re-query CCDS DB by Protein ID:ENSMUSP00000007433
Original member Current member EBI ENSMUST00000178033.4 ENSMUSP00000136746.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178033.4Link to Ensembl Protein Viewer:ENSMUSP00000136746.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178033Re-query CCDS DB by Protein ID:ENSMUSP00000136746
Original member Current member EBI ENSMUST00000194044.5 ENSMUSP00000141501.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000194044.5Link to Ensembl Protein Viewer:ENSMUSP00000141501.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000194044Re-query CCDS DB by Protein ID:ENSMUSP00000141501
Original member Current member EBI ENSMUST00000193888.5 ENSMUSP00000142234.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000193888.5Link to Ensembl Protein Viewer:ENSMUSP00000142234.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000193888Re-query CCDS DB by Protein ID:ENSMUSP00000142234
Original member Current member EBI ENSMUST00000195286.4 ENSMUSP00000142264.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000195286.4Link to Ensembl Protein Viewer:ENSMUSP00000142264.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000195286Re-query CCDS DB by Protein ID:ENSMUSP00000142264
Original member NCBI NM_178260.3 NP_839991.2 Updated not alive Link to Nucleotide Sequence:NM_178260.3Link to Protein Sequence:NP_839991.2Re-query CCDS DB by Nucleotide ID:NM_178260Re-query CCDS DB by Protein ID:NP_839991
Current member NCBI NM_178260.4 NP_839991.2 Accepted alive Link to Nucleotide Sequence:NM_178260.4Link to Protein Sequence:NP_839991.2Re-query CCDS DB by Nucleotide ID:NM_178260Re-query CCDS DB by Protein ID:NP_839991Link to BLAST:NP_839991.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_839991.2 126 Q6Y4S4-2 126 100% 0 0

Chromosomal Locations for CCDS 48362.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 133327250 133327340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 133329356 133329645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGATCTCAATGGCTTCTTGGCAGCTGCTGCTTCTCCTCTGTGTCGCCACCTATGGGGAGCCGCTGGCAA
AAGTGAAGCCTGGATCCACAGGCCAGCAGTCCGGACCCCAGGAACTCGTTAATGCCTGGGAAAAGGAATC
GCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGTAGGTCGTCGCCATGCCCGCCGGTT
GAGGGCCCCGCGGGGCGCCAGCGGCCCCTGTGTGCCTCCCGCAGTCGCCTGATCCCTGCGCCCCGCGGAG
CGGTGCTGGTGCAGCGGGAGAAGGACCTGTCCACCTACAACTGGAACTCCTTCGGCCTGCGCTACGGCAG
GAGGCAGGCGGCGCGGGCAGCACGGGGCTGA

Translation (126 aa):
MISMASWQLLLLLCVATYGEPLAKVKPGSTGQQSGPQELVNAWEKESRYAESKPGSAGLRARRSSPCPPV
EGPAGRQRPLCASRSRLIPAPRGAVLVQREKDLSTYNWNSFGLRYGRRQAARAARG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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