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Report for CCDS24919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24919.1 Public Mus musculus 11 Acap1 23 108 98 CCDS HistoryNCBI Gene:216859Re-query CCDS DB by CCDS ID:24919.1Re-query CCDS DB by GeneID:216859See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24919.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001631.6 ENSMUSP00000001631.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001631.6Link to Ensembl Protein Viewer:ENSMUSP00000001631.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000001631Re-query CCDS DB by Protein ID:ENSMUSP00000001631
Original member Current member NCBI NM_153788.3 NP_722483.2 Accepted alive Link to Nucleotide Sequence:NM_153788.3Link to Protein Sequence:NP_722483.2Re-query CCDS DB by Nucleotide ID:NM_153788Re-query CCDS DB by Protein ID:NP_722483Link to BLAST:NP_722483.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722483.2 740 Q8K2H4 740 100% 0 0

Chromosomal Locations for CCDS 24919.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69881625 69881725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69881982 69882031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69882382 69882492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69882585 69882694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69883584 69883756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69884322 69884491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69884586 69884680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69884796 69884865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69885393 69885604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69885693 69885816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69886968 69887068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69887156 69887207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69889237 69889346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69889436 69889510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69889618 69889713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69889820 69889864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69889999 69890182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69890434 69890492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69890589 69890642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69890864 69890983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69894600 69894657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69895286 69895338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2223 nt):
ATGACGGTCAAGCTAGATTTTGAAGAATGTCTCAAGGACTCACCCCGCTTCCGAGCCTCGATTGAACTGG
TGGAAACTGAAGTGTCAGAATTGGAGACCCGCCTGGAAAAGCTGCTAAAGCTGGGTTCCTGCCTCCTGGA
GAGCGGACAGCATTACCTTGCTGCCGGTCGTGCCTTCGTTGTTGGCATCTGTGACCTGGCTCGCCTGGGT
CCACCAGAGCCCATGATGGCGGAGTGTCTGGAAAAATTCACCGTGAGTCTGAACCACAAACTGGACAGCC
ATGCTGAGCTTCTTGATGCTACTCAACATACACTGCAGCAGCAAATCCAGACTCTGGTCAAGGAAGGTCT
CCGGGGCTTCCGAGAGGCTCGCAGGGATTTCTGGCGAGGGGCTGAGAACCTGGAGGCTGCTCTTACCCAC
AATGCAGAGGTCCCCAGGCGCCGTGTCCAAGAAGCAGAGGAGGCTGGAACTGCTTTGAGGACCGCTCGAG
CTGGGTACCGGAGTCGGGCATTAGATTATGCCCTGCAGGTCAATGTGATTGAGGATAAGAGGAAGTTTGA
CATCATGGAATTCGTACTGCGTTTGGTTGAGGCCCAGGCCACTTATTTCCAGCAGGGCCATGAAGAGCTA
AACAGGCTGGCTCAGTATCGGAAGGAATTGGGTACCCAGTTGCACAACCTGGTCTTGAACTCAGCTCGAC
AGAAGAGAGACATGGAACAGAGGCATGTGTTACTGAAGCAGAAGGAGCTAGGTGGCGAGGAGCCAGAGCC
AAGCCTAAAGGAGGGGCCTAGTGGCTTGGTAATGGAAGGACATCTTTTCAAACGTGCCAGCAATGCATTT
AAGACCTGGAGCAGACGCTGGTTCACCATTCAGAACAACCAGCTGGTTTACCAGAAGAAATATAAGGACC
CTGTAACCGTGGTGGTAGACGACCTTCGTCTCTGTACAGTGAAGCTCTGTCCAGACTCAGAAAGGCGTTT
CTGTTTCGAAGTAGTGTCCACCAGCAAGTCCTGTTTCCTCCAGGCTGACTCTGAGCGTCTCCTGCAGCTG
TGGGTCAGTGCTGTCCAGAGCAGCATTGCCTCAGCCTTCAGCCAGGCTCACCTGGAGAACAGCCCTCGGG
GGCCAGGCCAGGTCTCAGGATACCATGCCCCGGGCTCTGCTGCAACTCTGGCCTGTGGCGGGGCAGCCAG
AGGAAGGGAGTCTGGAGGAGTTGGTCAGGTGGCGGCCCAGGTACAAAGCGTGGATGGAAATGCGCAATGC
TGCGACTGCAGGGAGCCAGCCCCAGAGTGGGCCAGCATCAACCTTGGCGTCACTCTCTGCATTCAGTGTT
CTGGCATCCACAGGAGCCTCGGAGTTCATTTCTCCAAAGTCCGCTCTCTGACCCTTGACTCCTGGGAACC
AGAACTGGTGAAGCTTATGTGCGAGCTGGGGAATGTCATCATCAACCAGATCTATGAGGCCCGGGTGGAG
GCCATGGCGGTGAAGAAGCCAGGGCCCAGCTGCTCCCGGCAGGAAAAGGAAGCCTGGATTCATGCCAAGT
ATGTGGAGAAAAAGTTCCTGACCAAACTTCCTGAAATCCGTGGACGAAGAGGTGGCAGGGGACCCCCAAG
AGGACATCCTCCTGTGCCCCCAAAGCCTCCCATCAGGCCACACTCGGGCATTGTCAGATCCAAATCAGAG
TGCCCGTCTGATGACATGGGAAGCCTGCACCCTGGGGCCCTGCTGTTTCAAGCTGCTGGACATCCCCCAT
CTCTTCCTACCATGGCTGATGCCCTGGCCCATGGAGCTGATGTCAACTGGGTCAATGTGGGCCAGGGGAA
TGCCACACCTCTGATCCGGGCCACAGCTGCTAACTCTCTTCTGGCCTGCGAGTTTCTCCTCCAAAATGGG
GCGAATGTGAACCAAGCAGACAGTGCCGGCCGGGGTCCTCTCCACCATGCCACCATTCTTGGTCACACAG
GGCTCGCTTGCCTGTTCCTGAAACGGGGTGCTGATCTGGGGGCTCGAGACACAGAAGGCAGGGACCCTCT
GACTATCGCAATGGAAACCACTAATGCTGACATCGTAACCCTGCTACGATTGGCAAAGATGAGGGAGGCT
GAAGCGGCCCAGGGCCAGGCAGGAGACGAGACGTATCTCGACATATTCCGAGACTTCTCCCTCATGGCGT
CGGACGACCCAGAGAAACTGAGCCGTCGCAGTCACGACCTCCATACTCTGTGA

Translation (740 aa):
MTVKLDFEECLKDSPRFRASIELVETEVSELETRLEKLLKLGSCLLESGQHYLAAGRAFVVGICDLARLG
PPEPMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAENLEAALTH
NAEVPRRRVQEAEEAGTALRTARAGYRSRALDYALQVNVIEDKRKFDIMEFVLRLVEAQATYFQQGHEEL
NRLAQYRKELGTQLHNLVLNSARQKRDMEQRHVLLKQKELGGEEPEPSLKEGPSGLVMEGHLFKRASNAF
KTWSRRWFTIQNNQLVYQKKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCFLQADSERLLQL
WVSAVQSSIASAFSQAHLENSPRGPGQVSGYHAPGSAATLACGGAARGRESGGVGQVAAQVQSVDGNAQC
CDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVE
AMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGHPPVPPKPPIRPHSGIVRSKSE
CPSDDMGSLHPGALLFQAAGHPPSLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLLACEFLLQNG
ANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAMETTNADIVTLLRLAKMREA
EAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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