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Report for CCDS15093.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15093.1 Public Mus musculus 1 Fam124b 23 108 98 CCDS HistoryNCBI Gene:241128Re-query CCDS DB by CCDS ID:15093.1Re-query CCDS DB by GeneID:241128See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15093.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058748.1 ENSMUSP00000052208.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058748.1Link to Ensembl Protein Viewer:ENSMUSP00000052208.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000058748Re-query CCDS DB by Protein ID:ENSMUSP00000052208
Original member Current member NCBI NM_173425.3 NP_775601.1 Accepted alive Link to Nucleotide Sequence:NM_173425.3Link to Protein Sequence:NP_775601.1Re-query CCDS DB by Nucleotide ID:NM_173425Re-query CCDS DB by Protein ID:NP_775601Link to BLAST:NP_775601.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775601.1 456 Q8BLQ0 456 100% 0 0

Chromosomal Locations for CCDS 15093.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 80199910 80200548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 80212933 80213664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGGATGAGATACAGGAACCTCTAGCCTTGACTGTGCATCTTCTTGCCGACACTGGGAACGGTTTGCTTC
TGCAGCAGGCTCTGGACCAACTACTAGAATGTATCTGCCCAGAGGTGCGTCTCTTCCTGGTGTCTGAACG
TGCCAGGCCAGTGAACTACCATGAAAAGTACCACCCGCGGAGGGCCCGCTTCCCAGGAATGTCTGTTTTG
CTCTTCCTTCAGGAAAGCCTGGGACAAGAACGGTTGTTTCGAGTCTTGGACTTCCTACGGCGTTCACCCT
GGCAGGGTTTCCCTACCCAGCATGCACAGGGGAGGTCTTGTTCTTATCTCCCTGCCAATCAGGAATTCTA
CAGTCTGCACAACCAGATGCCAGTGTGGGGCATGAGGCCAGTGAATTGTGGCACTGATATCCTCAGGGTG
ACTCTGTACTGCAGTTTTGATAACTATGAAGATGCCATCAGACTCTATGAGATGCTTCTACAGAGAGACG
CCACTGTGCAAAAGAGCGACTTCTGTTTCTTTGTCCTCTATGCCACCGAGGGCTTCAGCCTGCAGCTCTC
TCTGAAGCAGCTGCCCCTGGGAATGTCAGTAGACCCCAAGGAGTCTTCTGTGCTGCAGTTCAGGGTTCAA
GAGATTGGGCAGCTGGTGCCTCTTCTACCCAATCCGTGTGTTCCCATCAGCAGCGCGAGGTGGCAGACTC
AGGACTATGATGGCAATAAGATTCTGCTGCAGGTCCATCCGAAGCCAGGAGTTGGCATTAAAAATGGTGA
GCATCCCTTCTTGAACGGCTGCTTGAGAGGTGACACACATCCACAGGACTCCAGTCTGAACTCCGTCTCC
ACACAGAGAACCTTGGAGCCAAGGAGCCGGAGGAGGAGCAGGAGTCGGAGGTTCAAAGTACATTCGCTGG
AGCTTCCACAACCCAGTGGCTCATGGGAAAACTCTACTGACCCTTTGTGGAGAAGGCTTGGCTGGTCCAC
CCTGGCCGACAGCTCCGCGTCAGGCATGCAGCAGCGCCGACTGTCTATCCCCATAGAACCCAAGATGGGA
AGGAACGTTCTTAGAGAAGATGGCTTTGAGAAGCTCGAGGCGGAGACAAATGTTGACACTGGCTTCACCA
TCATCAATTCCGAACCCAGGCGATCTTTTCCGAGCAGATTTCCCAGGGATTTTCAGAGCAGCCAACCACC
ACGCTGCTTGTCAGGCTCTTCCTTAGAGGTAACTGTTTCCCCAAACCAAGGAGTCTTTAAGGATAGACTC
CACCCTCTGTCACTTCCTAGTCAAAGGGACTTTGGTGCAAAGAAGGTCATCTCAAAATGTTCCCATCATC
TGCAGGCCCAGGGTGAAGAGAAAGAAGAATTCTTTATATAG

Translation (456 aa):
MDEIQEPLALTVHLLADTGNGLLLQQALDQLLECICPEVRLFLVSERARPVNYHEKYHPRRARFPGMSVL
LFLQESLGQERLFRVLDFLRRSPWQGFPTQHAQGRSCSYLPANQEFYSLHNQMPVWGMRPVNCGTDILRV
TLYCSFDNYEDAIRLYEMLLQRDATVQKSDFCFFVLYATEGFSLQLSLKQLPLGMSVDPKESSVLQFRVQ
EIGQLVPLLPNPCVPISSARWQTQDYDGNKILLQVHPKPGVGIKNGEHPFLNGCLRGDTHPQDSSLNSVS
TQRTLEPRSRRRSRSRRFKVHSLELPQPSGSWENSTDPLWRRLGWSTLADSSASGMQQRRLSIPIEPKMG
RNVLREDGFEKLEAETNVDTGFTIINSEPRRSFPSRFPRDFQSSQPPRCLSGSSLEVTVSPNQGVFKDRL
HPLSLPSQRDFGAKKVISKCSHHLQAQGEEKEEFFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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