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Report for CCDS33786.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33786.1 Public Homo sapiens 3 EIF4E3 24 110 108 CCDS HistoryNCBI Gene:317649Re-query CCDS DB by CCDS ID:33786.1Re-query CCDS DB by GeneID:317649See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33786.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295612.7 ENSP00000295612.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295612.7Link to Ensembl Protein Viewer:ENSP00000295612.3Re-query CCDS DB by Nucleotide ID:ENST00000295612Re-query CCDS DB by Protein ID:ENSP00000295612
Original member Current member EBI ENST00000389826.7 ENSP00000374476.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389826.7Link to Ensembl Protein Viewer:ENSP00000374476.3Re-query CCDS DB by Nucleotide ID:ENST00000389826Re-query CCDS DB by Protein ID:ENSP00000374476
Original member Current member EBI ENST00000448225.5 ENSP00000410350.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448225.5Link to Ensembl Protein Viewer:ENSP00000410350.1Re-query CCDS DB by Nucleotide ID:ENST00000448225Re-query CCDS DB by Protein ID:ENSP00000410350
Original member Current member EBI ENST00000421769.6 ENSP00000411762.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421769.6Link to Ensembl Protein Viewer:ENSP00000411762.2Re-query CCDS DB by Nucleotide ID:ENST00000421769Re-query CCDS DB by Protein ID:ENSP00000411762
Original member Current member NCBI NM_001134649.3 NP_001128121.1 Accepted alive Link to Nucleotide Sequence:NM_001134649.3Link to Protein Sequence:NP_001128121.1Re-query CCDS DB by Nucleotide ID:NM_001134649Re-query CCDS DB by Protein ID:NP_001128121Link to BLAST:NP_001128121.1
Original member Current member NCBI NM_001134650.1 NP_001128122.1 Accepted alive Link to Nucleotide Sequence:NM_001134650.1Link to Protein Sequence:NP_001128122.1Re-query CCDS DB by Nucleotide ID:NM_001134650Re-query CCDS DB by Protein ID:NP_001128122Link to BLAST:NP_001128122.1
Original member Current member NCBI NM_001282886.2 NP_001269815.1 Accepted alive Link to Nucleotide Sequence:NM_001282886.2Link to Protein Sequence:NP_001269815.1Re-query CCDS DB by Nucleotide ID:NM_001282886Re-query CCDS DB by Protein ID:NP_001269815Link to BLAST:NP_001269815.1
Original member Current member NCBI NM_173359.5 NP_775495.1 Accepted alive Link to Nucleotide Sequence:NM_173359.5Link to Protein Sequence:NP_775495.1Re-query CCDS DB by Nucleotide ID:NM_173359Re-query CCDS DB by Protein ID:NP_775495Link to BLAST:NP_775495.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128121.1 118 Q8N5X7-2 118 100% 0 0
NP_001128122.1 118 Q8N5X7-2 118 100% 0 0
NP_001269815.1 118 Q8N5X7-2 118 100% 0 0
NP_775495.1 118 Q8N5X7-2 118 100% 0 0

Chromosomal Locations for CCDS 33786.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 71684682 71684728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 71690010 71690165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 71693875 71693941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 71696460 71696520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 71699614 71699639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGAGAGGAGAGAGGCGACCACTTTGGGAAGAGGAGAGTAATGCAAAGGGTGGCGTATGGAAGATGAAAG
TCCCCAAGGACAGCACGTCCACAGTTTGGAAAGAGTTGCTGTTAGCAACCATCGGGGAACAGTTCACAGA
CTGTGCCGCAGCAGATGATGAAGTAATAGGAGTTAGTGTCAGTGTTCGGGACCGAGAAGACGTCGTCCAA
GTCTGGAATGTAAATGCCTCTTTAGTGGGTGAAGCGACTGTTTTAGAAAAGATCTATGAACTTCTGCCCC
ACATAACTTTTAAAGCAGTATTTTATAAACCCCATGAAGAGCATCATGCTTTTGAAGGTGGACGTGGAAA
ACACTAA

Translation (118 aa):
MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQ
VWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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