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Report for CCDS6314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6314.1 Public Homo sapiens 8 KCNV1 24 110 108 CCDS HistoryNCBI Gene:27012Re-query CCDS DB by CCDS ID:6314.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6314.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297404.1 ENSP00000297404.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000297404.1Link to Ensembl Protein Viewer:ENSP00000297404.1Re-query CCDS DB by Nucleotide ID:ENST00000297404Re-query CCDS DB by Protein ID:ENSP00000297404
Original member Current member EBI ENST00000524391.6 ENSP00000435954.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524391.6Link to Ensembl Protein Viewer:ENSP00000435954.1Re-query CCDS DB by Nucleotide ID:ENST00000524391Re-query CCDS DB by Protein ID:ENSP00000435954
Original member Current member NCBI NM_014379.4 NP_055194.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014379.4Link to Protein Sequence:NP_055194.1Re-query CCDS DB by Nucleotide ID:NM_014379Re-query CCDS DB by Protein ID:NP_055194Link to BLAST:NP_055194.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055194.1 500 Q6PIU1 500 100% 0 0

Chromosomal Locations for CCDS 6314.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 109968088 109968599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109972258 109972787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109973928 109974388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCCTGACCTCCCTGGACTCTA
GTGTCTTCTGCAGCGAGGGTGAAGGGGAGCCCTTGGCGCTCGGGGACTGCTTCACGGTCAACGTGGGCGG
CAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAAGCTGGCCGTG
GTGGTGGCTTCCTACCGCCGCCCCGGGGCCCTGGCCGCCGTGCCCAGCCCTCTGGAGCTTTGCGACGATG
CCAACCCCGTGGACAACGAGTACTTCTTCGACCGCAGCTCGCAGGCGTTCCGATATGTCCTGCACTACTA
CCGCACCGGCCGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTCCTTCCTGCAGGAGATCCAGTACTGG
GGCATCGATGAGCTCAGCATCGATTCCTGCTGCAGGGACAGATACTTCAGAAGGAAAGAGCTGAGTGAAA
CTTTAGACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGG
ACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTTCCACAGCTGCCCGT
ATCTTTGGCGTCATCTCCATTATCTTCGTGGTGGTGTCCATCATTAACATGGCCCTGATGTCAGCTGAGT
TAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTGGTTCACCGGGGAGTT
TGTCCTCCGCTTCCTGTGTGTGCGGGACAGGTGTCGCTTCCTAAGAAAGGTGCCAAACATCATAGACCTC
CTTGCCATCTTGCCCTTCTACATCACTCTTCTGGTAGAGAGCCTAAGTGGGAGCCAGACCACGCAGGAGC
TGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAAGCTGGGCAG
ACATTCCACAGGATTACGCTCCCTTGGGATGACAATCACCCAGTGTTACGAAGAAGTCGGCCTACTGCTC
CTATTTCTATCCGTGGGAATCTCTATATTTTCAACTGTAGAATACTTTGCTGAGCAAAGCATTCCTGACA
CAACCTTCACAAGTGTCCCTTGTGCATGGTGGTGGGCCACCACCTCTATGACTACTGTGGGATATGGGGA
CATTAGACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTGTATATTATCGGGAATTCTTGTCTTG
GCCTTGCCTATTGCTATTATTAACGATCGCTTCTCTGCTTGCTACTTCACCTTGAAACTCAAGGAAGCAG
CTGTTAGACAGCGTGAAGCCCTAAAGAAGCTTACCAAGAATATAGCCACTGACTCATATATCAGTGTTAA
CTTGAGAGATGTCTATGCCCGGAGTATCATGGAGATGCTGCGACTGAAAGGCAGAGAAAGAGCAAGTACT
AGGAGCAGCGGGGGAGATGATTTCTGGTTTTGA

Translation (500 aa):
MPSSGRALLDSPLDSGSLTSLDSSVFCSEGEGEPLALGDCFTVNVGGSRFVLSQQALSCFPHTRLGKLAV
VVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYW
GIDELSIDSCCRDRYFRRKELSETLDFKKDTEDQESQHESEQDFSQGPCPTVRQKLWNILEKPGSSTAAR
IFGVISIIFVVVSIINMALMSAELSWLDLQLLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPNIIDL
LAILPFYITLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLL
LFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVL
ALPIAIINDRFSACYFTLKLKEAAVRQREALKKLTKNIATDSYISVNLRDVYARSIMEMLRLKGRERAST
RSSGGDDFWF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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