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Report for CCDS22600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22600.1 Public Mus musculus 8 Fhod1 23 108 98 CCDS HistoryNCBI Gene:234686Re-query CCDS DB by CCDS ID:22600.1Re-query CCDS DB by GeneID:234686See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22600.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014922.4 ENSMUSP00000014922.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014922.4Link to Ensembl Protein Viewer:ENSMUSP00000014922.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000014922Re-query CCDS DB by Protein ID:ENSMUSP00000014922
Original member Current member NCBI NM_177699.4 NP_808367.2 Accepted alive Link to Nucleotide Sequence:NM_177699.4Link to Protein Sequence:NP_808367.2Re-query CCDS DB by Nucleotide ID:NM_177699Re-query CCDS DB by Protein ID:NP_808367Link to BLAST:NP_808367.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808367.2 1197 Q6P9Q4 1197 100% 0 0

Chromosomal Locations for CCDS 22600.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105329397 105329479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105329569 105329769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105329847 105330009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105330095 105330287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105330387 105330577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105331129 105331290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105331370 105331489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105331642 105331824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105332037 105332192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105332910 105333604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105334687 105334802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105336382 105336561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105336639 105336796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105336887 105337030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105337123 105337217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105337318 105337429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105337675 105337769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105337852 105337957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105338030 105338097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105338402 105338466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105338854 105338960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105347653 105347853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3594 nt):
ATGGCGGGCGAGGAAGAGCGCGGGGATGGGGACCCAGTATCCGTGGTAACTGTGAGAGTGCAGTACCTGG
AAGACACCGACCCTTTCGCTTGTGCCAACTTCCCGGAACCACGCCGGGCCCCCACCTGCAGCCTGGACGG
GGCTCTGCCCCTGAGTGCGCAGATCCCTGCTCTGCACCGACTCCTGGGGGCGCCTCTTAAGCTGGAGGAC
TGTGCATTGCAAGTGTCTCCCTCCGGATACTACCTGGACCCGGAGCTGTCCCTAGAAGAACAGCGGGAGA
TGCTGGAGGGTTTCTATGAAGAGATCAGCAAAGGGCGGAAGCCCACGTTAATCCTGCGGACCCAGCTCTC
CGTGAGGGTCAATGCTATCTTGGAAAAGCTGTATGGCTCCAGTGGCCCCGAGCTCCGCCGATCTCTCTTC
TCATTAAAGCAGATATTCCAGGAAGACAAGGACCTGGTGCCCGAATTCGTGCACTCGGAGGGTCTGAGTT
GCCTGATCCGCGTGGGTGCTGCTGCAGACCACAACTACCAGAGCTACATCCTTCGAGCCCTGGGCCAGCT
GATGCTGTTTGTGGATGGGATGCTGGGGGTGGTGGCCCACAGCGAGACCGTGCAGTGGCTGTATACCCTG
TGTGCTAGCCTGTCCCGCTTGGTGGTAAAGACAGCCCTGAAGCTGCTGCTGGTGTTTGTGGAGTATTCCG
AGAACAACGCGCCGCTGTTCATCCAGGCAGTCAACGCAGTAGCCAGTGCCACCGGTACTCTTCCCTGGGC
CAACTTGGTGTCCATCCTGGAGGAGAAGAATGGAGCTGATGCAGAGTTGTTGGTGTACACTGTCACTCTC
ATTAACAAGACGCTGGCGGCACTCCCAGACCAGGACTCCTTCTATGATGTGACAGATGCTCTGGAGCAGC
AGGGCATGGAAGCGCTGGTCCAACGTTTCTTGGGCACCGCTGGCACTGATGTTGACCTGCGAACCCAGCT
AACGCTCTATGAGAGTGCCCTTCGGTTAGAGGATGGAGATATGGAAGAGGCTGCAGCCGCCGCTGCTGCA
GGTGGCCGGCGAGAGCGGCGGAAGCCATCCTCGGAGGAGGGCAAAAGGAGCCGAAGATCACTAGAAGGTG
GAGGCTGCCCTGTGCGTGCCCCAGAACCTGGCTCTACAGGCTCCGCCTCACCAGTAGGCTCCACCCCCTC
CACTGGCTCCGCCCCGCCTACAAATCCAGCCTTCAGCTCTACTGGCCCAGCCTCTGGCCTTCTTCGAACC
TCAGTGAACCTCTTTCCTACCATTTCCGTGGGGCCGTCAGTGGACAGTTCCTGTGAGAGAAGCGTCTACA
AAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAGACGGAGAAGCAGGCTGCTCTGGCCCAAGGCCGAGC
GGAGACGCTGGCTGGAGCCACGGTAGATGACACTGATGGATCATCAGGCACAAGGGAACTGTGGGACTCC
CCAGAGCCAGCCTCTGCACCCAGGACACCCCAGAGCCCTGTTTCCCGAATCCTGCTGCGCACCCAGCGGA
GTCTTGAGCCAGAGCCCAAGAAGCCAGTGTCACCACCAAGCCCTAAGGCTGAGCCTATCCAGGAGCCTCC
CACCTGTGTCCCCAAGCTCTGCATTGGGGACTTGGACTTCTCAGACCTAGGGGAGGATGAAGACCAGGAC
ACACTGAATGTGGAATCTGTGGAGGCTGGAAAAGCATCTCCCTTCCTGTCATCTCTATCGCCCTCACTCT
CTGGGGGTCCCCCTCCTCCGCCCCCACCTCCTCCACCCATCACAGGCTCCTGCCCCCCACCTCCGCCCCC
ACCTCTCCCCCCACCCGCCACAGGCTCCTGCCCTCCACCTCCGCCCCCACCTCCCCCACCCATCATAGGC
TCCTGCCCACCGCCTCCACCCCTGGCTGCTCCTTTTACCCACTCAGCACTTGACGGCCCAAGGCACCCCA
CCAAAAGGAAGACAGTAAAACTTTTCTGGCGGGAACTAAAGCTGACTGGGGGCCCTGGGTGCTCTAGAAG
CCGCTTTGGGCCTTGTCCTACCCTGTGGGCCTCGCTGGAACCCGTCTCGGTGGACACAGCCCGCCTGGAA
CACCTATTTGAGTCCAGAGCCAAGGATGTGCTACCAACCAAGAAAGCTGGTGAGGGCCGCCGGACAATGA
CCGTAGTGCTGGACCCCAAGCGCAGCAATGCCATCAACATTGGCCTAACCACTCTGCCACCCGTGCACGT
CATCAAGGCTGCCCTGCTCAACTTCGATGAGTTTGCTGTCAGCAAAGATGGCATTGAGAAACTGCTGACA
ATGATGCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGCCCAGCTGGCTAACCCCGATGTACCCCTCG
GCCCCGCTGAGAATTTCCTGATGACGCTTGCTTCCATTGGAGGCCTGGCTGCGCGCCTACAGCTCTGGGC
TTTCAAGCTGGACTATGAAAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTGATCTGAAAGTGGGCATG
GAACAGCTGGTACACAATGCCACCTTCCGCTGTATTCTGGCTACCCTTTTGGCTGTGGGCAACTTCCTCA
ATGGTTCCCAGAGCAGTGGCTTTGAGCTGAGCTACCTGGAGAAGGTGTCAGAAGTGAAGGACACAGTGCG
ACGGCAGTCATTGCTCTATCATCTCTGCTCCCTGGTGCTCCAGACCCGACCTGATTCCTCTGACCTCTAC
TCAGAAATTCCTGCCCTCACCCGCTGTGCCAAGGTGGACTTTGAACAGCTGACTGAGAACCTAGGGCAGC
TGGAGTGCCGGAGCCAGGCTGCCGAGGACAGCCTCCGGAGCTTGGCTAAGCACGAGCTCTCCCCAGCTCT
GCGTGCTCGCCTCACCCACTTCTTGGCCCAGTGTACCCGCCGGGTAGCCATGTTAAGAGTAGTGCATCGC
CGAGTCTGCAATAGGTTCCATGCCTTCCTGCTCTACCTGGGCTACACCCCACAGGCAGCAAGGGATGTAC
GCATCATGCAGTTCTGCCACACACTGAGAGAGTTTGCCCTTGAGTATCGGACTTGTCGGGAACGGGTACT
GCAGCAGCAGCAGAAGCGGGCTACATACCGTGAGCGCAACAAGACCCGTGGTCGCATGATTACCGAGACA
GAGAAGTTCTCAGGTGTGGCTGGGGAGGCCCCCAATAACCTGTCTGTCCCAGTGGCTGTGGGCAGCGGGC
CAGGTCAGGGTGATACTGACAATCATGCCAGCATGAAGAGCCTGCTTACCAGCAGGCCGGAAGATGCCAC
ACACAGCCGACGCAGCAGAGGTATGGTCCAGAGCAGTTCCCCCGTCTCACACACAGCAGTGGGGCCCTCC
GCTGCATCCCCTGAGGAGACTGCAGCCTCCGGCTTACCCACCGACACGTCAGATGAGATAATGGACCTGC
TGGTGCAGTCAGTTACCAAGAGCGGTCCTAGAGCCTTAGCTGCTCGGGAGAGGAAGCGCTCTCGTGGCAA
CCGAAAGTCCTTGAGACGGACACTGAAGAGTGGACTTGGAGATGACCTGGTGCAGGCACTGGGACTAAGC
AAAGCTCCTGGTCTAGAGGTGTGA

Translation (1197 aa):
MAGEEERGDGDPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCSLDGALPLSAQIPALHRLLGAPLKLED
CALQVSPSGYYLDPELSLEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLYGSSGPELRRSLF
SLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSETVQWLYTL
CASLSRLVVKTALKLLLVFVEYSENNAPLFIQAVNAVASATGTLPWANLVSILEEKNGADAELLVYTVTL
INKTLAALPDQDSFYDVTDALEQQGMEALVQRFLGTAGTDVDLRTQLTLYESALRLEDGDMEEAAAAAAA
GGRRERRKPSSEEGKRSRRSLEGGGCPVRAPEPGSTGSASPVGSTPSTGSAPPTNPAFSSTGPASGLLRT
SVNLFPTISVGPSVDSSCERSVYKARFLENVAAAETEKQAALAQGRAETLAGATVDDTDGSSGTRELWDS
PEPASAPRTPQSPVSRILLRTQRSLEPEPKKPVSPPSPKAEPIQEPPTCVPKLCIGDLDFSDLGEDEDQD
TLNVESVEAGKASPFLSSLSPSLSGGPPPPPPPPPPITGSCPPPPPPPLPPPATGSCPPPPPPPPPPIIG
SCPPPPPLAAPFTHSALDGPRHPTKRKTVKLFWRELKLTGGPGCSRSRFGPCPTLWASLEPVSVDTARLE
HLFESRAKDVLPTKKAGEGRRTMTVVLDPKRSNAINIGLTTLPPVHVIKAALLNFDEFAVSKDGIEKLLT
MMPTEEERQKIEEAQLANPDVPLGPAENFLMTLASIGGLAARLQLWAFKLDYESMEREIAEPLFDLKVGM
EQLVHNATFRCILATLLAVGNFLNGSQSSGFELSYLEKVSEVKDTVRRQSLLYHLCSLVLQTRPDSSDLY
SEIPALTRCAKVDFEQLTENLGQLECRSQAAEDSLRSLAKHELSPALRARLTHFLAQCTRRVAMLRVVHR
RVCNRFHAFLLYLGYTPQAARDVRIMQFCHTLREFALEYRTCRERVLQQQQKRATYRERNKTRGRMITET
EKFSGVAGEAPNNLSVPVAVGSGPGQGDTDNHASMKSLLTSRPEDATHSRRSRGMVQSSSPVSHTAVGPS
AASPEETAASGLPTDTSDEIMDLLVQSVTKSGPRALAARERKRSRGNRKSLRRTLKSGLGDDLVQALGLS
KAPGLEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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