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Report for CCDS30498.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30498.1 Public Mus musculus X Mbtps2 23 108 98 CCDS HistoryNCBI Gene:270669Re-query CCDS DB by CCDS ID:30498.1Re-query CCDS DB by GeneID:270669See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30498.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058098.14 ENSMUSP00000059471.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058098.14Link to Ensembl Protein Viewer:ENSMUSP00000059471.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000058098Re-query CCDS DB by Protein ID:ENSMUSP00000059471
Original member Current member NCBI NM_172307.3 NP_758511.1 Accepted alive Link to Nucleotide Sequence:NM_172307.3Link to Protein Sequence:NP_758511.1Re-query CCDS DB by Nucleotide ID:NM_172307Re-query CCDS DB by Protein ID:NP_758511Link to BLAST:NP_758511.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758511.1 515 Q8CHX6 515 100% 0 0

Chromosomal Locations for CCDS 30498.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 157550928 157551150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157552916 157552991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157554883 157555078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157555597 157555691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157558885 157559065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157561383 157561501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157572859 157572986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157576084 157576187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157591354 157591555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157593725 157593873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157598496 157598570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1548 nt):
ATGATTCCGGTGTCGCTGCTGGTGGTGGTGGTGGGTGGTTGGACTGCCGTCTACCTGGCCGACTTGGTGT
TGAAGTCATCTGTGTATTTTAAACATTCTTATGAAGACTGGCTGGAAAACAATGGATTGAGCATCTCTCC
TTTTCATATAAGATGGCAAACTTCAATTTTTAATCGTGCCTTTTACAGTTGGGGACGGCGGAAAGCAAGG
ATGCTTTACCAATGGTTCAATTTTGGAATGGTGTTTGGCGTGATTGCCATGTTCAGCTCTTTTTTTCTCC
TTGGAAAAACACTGATGCAGACTTTGGCACAAATGATGGCTGACTCTCCCTCTCCTTATTCTTCCTCTTC
CTCTTCCTCCTCTTCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCTCTTCACAATGAACAGGTGTTGCAA
GTTGTGGTTCCCGGTATAAATTTACCTGTCAATCAGCTGACTTACTTCTTCGCTGCAGTCCTCATTAGTG
GTGTTGTACATGAAATTGGACACGGTATAGCAGCTATTAGGGAACAAGTTCGATTTAATGGCTTTGGAAT
TTTTCTCTTCATTATTTATCCTGGGGCATTTGTTGATCTGTTCACCACCCATTTGCAACTTATATCACCA
GTCCAGCAGCTAAGGATATTTTGTGCAGGTATATGGCATAATTTTGTCCTTGCTCTCCTTGGTATTTTAG
CTCTTGTTCTCCTCCCAGTAATCCTCTTGCCTTTTTACTACACTGGAGTTGGGGTACTTATCACTGAAGT
CGCAGAGGACTCACCTGCCATTGGACCCAGAGGCCTTTTTGTGGGAGACCTTGTCACTCATCTACAGGAT
TGTCCCGTTACTAATGTGCAAGATTGGAATGAATGTTTAGACACCATTGCATATGAGCCCCAAATTGGGT
ATTGTATAAGTGCATCAACGTTACAACAATTAAGCTTCCCAGTTAGAGCATACAAACGACTAGATGGTTC
TACTGAATGCTGTAACAATCACAGCCTCACAGATGTGTGCTTTTCCTACAGAAATAATTTCAATAAACGT
TTGCATACGTGTCTACCTGCCCGGAAAGCAGTTGAAGCTACTCAAGTTTGTAGAAGCAATAAAGATTGCA
AAAGCGGCGCAAGTTCTAGCTTCTGTATAGTACCGTCCTTGGAAACTCACACCCGACTAATCAAAGTGAA
ACATCCCCCGCAAATTGATATGCTGTATGTAGGGCACCCACTGCATCTTCACTACACAGTGAGCATTACA
AGTTTCATCCCACGTTTCAACTTTCTAAGCATAGATCTGCCAGTGATTGTGGAGACATTTGTCAAGTACC
TGATTTCTCTTTCTGGAGCTCTGGCTATTGTTAATGCAGTGCCCTGCTTTGCCTTGGATGGTCAATGGAT
TTTAAACTCTTTCCTGGATGCTACCCTTACTTCAGTAATTGGAGACAATGATGTCAAAGATCTGATTGGA
TTTTTCATCTTGCTTGGTGGCAGTGTACTTTTGGCTGCCAATGTGACACTGGGACTCTGGATGGTTACAG
CACGGTAA

Translation (515 aa):
MIPVSLLVVVVGGWTAVYLADLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTSIFNRAFYSWGRRKAR
MLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSPYSSSSSSSSSSSSSSSSSSSLHNEQVLQ
VVVPGINLPVNQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISP
VQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQD
CPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKR
LHTCLPARKAVEATQVCRSNKDCKSGASSSFCIVPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSIT
SFIPRFNFLSIDLPVIVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIG
FFILLGGSVLLAANVTLGLWMVTAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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