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Report for CCDS57032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57032.1 Public Mus musculus 16 Or5ac25 23 108 98 CCDS HistoryNCBI Gene:404311Re-query CCDS DB by CCDS ID:57032.1Re-query CCDS DB by GeneID:404311See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57032.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055868.3 ENSMUSP00000053192.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055868.3Link to Ensembl Protein Viewer:ENSMUSP00000053192.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000055868Re-query CCDS DB by Protein ID:ENSMUSP00000053192
Original member Current member EBI ENSMUST00000208875.2 ENSMUSP00000147068.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208875.2Link to Ensembl Protein Viewer:ENSMUSP00000147068.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208875Re-query CCDS DB by Protein ID:ENSMUSP00000147068
Original member Current member NCBI NM_207551.2 NP_997434.2 Accepted alive Link to Nucleotide Sequence:NM_207551.2Link to Protein Sequence:NP_997434.2Re-query CCDS DB by Nucleotide ID:NM_207551Re-query CCDS DB by Protein ID:NP_997434Link to BLAST:NP_997434.2

Chromosomal Locations for CCDS 57032.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 59361299 59362216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGAGCTGAACAGGACCCAGCTGACTGAATTTGTTCTCAGAGGAATAACAGATCGTTCAGAGCTGCAAG
TCCCCCTGTTCCTGGTGTTCTTTCTCATCTATGTTATCACCATGGTGGGCAACCTTGGCTTAATCTTTCT
CATCTGGAAGGACCCTCATCTTCACACACCCATGTACCTTTTCCTTGGAAATTTGGCTTTTGCTGATGCC
TGTACTTCATCCTCTGTGACACCAAAGATGCTTATGAAATTTTCAAATAAGAATGACATGATATCCATGG
GTGAGTGTTTTGCTCAATTTTATTTTTTTTGTTTAAGTGCAACTGCGGAATGTTTCATCCTGGTAGCGAT
GGCCTATGACCGCTATGTAGCCATATGCAAACCTCTGCTCTATGTAGTGGTGATGTCCAACAGACTCTGT
ATTCAGTTCATAGGTGTATCCTATCTAATTGGACTTCTACATGGTCTACTTCATGTAGGATTGTTATTTA
GGTTAACGTTTTGTAGTTCCAATGTAATAGATCATTTCTACTGTGAAATCCTGCCACTTTATAGAATTTC
TTGCACTGACCCATCTATCAATGTACTGGTAGCTTTCATTATGGCTATTTTAATACAAGTGAGTACCTTT
ATGAGTATTATAGTCTCCTATATCCTCATCCTCTTTGCCATCCTGAGAACAAAGTCTGAGAGGGGCAGAA
ACAAAGCCTTCTCTACTTGTAGTTCCCACCTGTCATCTGTATCTTTGTTCTATGGCACTCTCTTCATCAT
ATATGTCCTCTCTGGCTCTGACAAAGATAATTATCAGGGTAAAATGTATTCACTGTTCTATACCATTATC
ATTCCTCTGCTAAACCCCTTCATTTACAGCCTCAGAAATAAAGAAGTCATCGGTGCCTTGAGAAAACTCA
GAGAATGA

Translation (305 aa):
MELNRTQLTEFVLRGITDRSELQVPLFLVFFLIYVITMVGNLGLIFLIWKDPHLHTPMYLFLGNLAFADA
CTSSSVTPKMLMKFSNKNDMISMGECFAQFYFFCLSATAECFILVAMAYDRYVAICKPLLYVVVMSNRLC
IQFIGVSYLIGLLHGLLHVGLLFRLTFCSSNVIDHFYCEILPLYRISCTDPSINVLVAFIMAILIQVSTF
MSIIVSYILILFAILRTKSERGRNKAFSTCSSHLSSVSLFYGTLFIIYVLSGSDKDNYQGKMYSLFYTII
IPLLNPFIYSLRNKEVIGALRKLRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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