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Report for CCDS27192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27192.1 Public Mus musculus 14 Wdfy2 23 108 98 CCDS HistoryNCBI Gene:268752Re-query CCDS DB by CCDS ID:27192.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014691.9 ENSMUSP00000014691.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014691.9Link to Ensembl Protein Viewer:ENSMUSP00000014691.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000014691Re-query CCDS DB by Protein ID:ENSMUSP00000014691
Original member Current member NCBI NM_175546.4 NP_780755.2 Accepted alive Link to Nucleotide Sequence:NM_175546.4Link to Protein Sequence:NP_780755.2Re-query CCDS DB by Nucleotide ID:NM_175546Re-query CCDS DB by Protein ID:NP_780755Link to BLAST:NP_780755.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780755.2 400 Q8BUB4 400 100% 0 0

Chromosomal Locations for CCDS 27192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 62837921 62838057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62885810 62885877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62900255 62900328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62925130 62925184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62930228 62930378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62934290 62934402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62944021 62944147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62948643 62948748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62951915 62952016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62953012 62953142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62954861 62954969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62956280 62956309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGGCGGCGGAGATCCAGCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGC
AGGAGGTGGTCAACATGGCGGTGATTGTACCTAAAGAAGAGGGTGTCATCAGCGTCTCGGAGGACAGGAC
AGTTCGTGTTTGGTTAAAGAGGGACAGTGGACAGTACTGGCCAAGCATCTACCATGCAATGCCTTCTCCA
TGTTCATGCATGTCTTTTAACCCGGAAACAAGAAGACTGTCCATAGGTCTAGACAATGGTACAATCTCAG
AGTTTATTTTGTCTGAAGATTATAACAAGATGACACCTGTGAAAAACTATCAAGCACATCAGAGCAGAGT
AACGATGGTCCTGTTTGTTCTGGAACTGGAGTGGGTGCTGAGCACAGGACAGGACAAGCAGTTCGCCTGG
CACTGCTCTGAGAGTGGACAGCGCCTGGGAGGTTACCGCACCAGTGCTGTGGCCTCAGGCCTGCAATTTG
ATGTTGAAACCCGTCATGTGTTTATTGGCGATCACTCGGGCCAAGTAACCATCCTCAAACTGGAACAAGA
AAACTGCACACTGCTCACATCCTTCAGAGGGCACACAGGAGGGGTGACAGCACTCTGCTGGGACCCGGTG
CAGCGCGTGCTATTCTCAGGCAGTTCCGATCACTCTGTCATCATGTGGGACATCGGTGGGAGAAAAGGCA
CGGCCATCGAACTCCAAGGACACAATGACAAAGTCCAGGCCCTCTCCTATGCACAGCACACACGACAGCT
CATCTCATGTGGCGGTGACGGTGGCATTGTCGTCTGGAACATGGATGTGGAAAGGCAGGAGACCCCTGAG
TGGTTGGACAGTGACTCCTGCCAAAAGTGTGACCAGCCTTTCTTCTGGAACTTCAAGCAAATGTGGGACA
GTAAGAAAATTGGACTAAGACAGCACCACTGCCGGAAGTGTGGGAAGGCCGTGTGCGGCAAGTGTAGCTC
CAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGTCTGCGACAGCTGCCACGAGGCC
ATCACAGATGAAGAACGCGCCCCCACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATT
TCGATGCAACCAGGGGATGGTTACTGACTTCTGGAACTGACAAGGTAATTAAGCTGTGGGACATGACCCC
AGTGGTGTCATGA

Translation (400 aa):
MAAEIQPQPLTRKPILLQRVEGSQEVVNMAVIVPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHAMPSP
CSCMSFNPETRRLSIGLDNGTISEFILSEDYNKMTPVKNYQAHQSRVTMVLFVLELEWVLSTGQDKQFAW
HCSESGQRLGGYRTSAVASGLQFDVETRHVFIGDHSGQVTILKLEQENCTLLTSFRGHTGGVTALCWDPV
QRVLFSGSSDHSVIMWDIGGRKGTAIELQGHNDKVQALSYAQHTRQLISCGGDGGIVVWNMDVERQETPE
WLDSDSCQKCDQPFFWNFKQMWDSKKIGLRQHHCRKCGKAVCGKCSSKRSSIPLMGFEFEVRVCDSCHEA
ITDEERAPTATFHDSKHNIVHVHFDATRGWLLTSGTDKVIKLWDMTPVVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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