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Report for CCDS49176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49176.1 Public Mus musculus 12 Mok 23 108 98 CCDS HistoryNCBI Gene:26448Re-query CCDS DB by CCDS ID:49176.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49176.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070565.14 ENSMUSP00000068904.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070565.14Link to Ensembl Protein Viewer:ENSMUSP00000068904.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000070565Re-query CCDS DB by Protein ID:ENSMUSP00000068904
Original member NCBI NM_011973.2 NP_036103.1 Updated not alive Link to Nucleotide Sequence:NM_011973.2Link to Protein Sequence:NP_036103.1Re-query CCDS DB by Nucleotide ID:NM_011973Re-query CCDS DB by Protein ID:NP_036103
Current member NCBI NM_011973.3 NP_036103.1 Accepted alive Link to Nucleotide Sequence:NM_011973.3Link to Protein Sequence:NP_036103.1Re-query CCDS DB by Nucleotide ID:NM_011973Re-query CCDS DB by Protein ID:NP_036103Link to BLAST:NP_036103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036103.1 420 Q9WVS4-1 420 100% 0 0

Chromosomal Locations for CCDS 49176.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110808041 110808121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110808205 110808405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110809909 110810023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110810605 110810778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110811779 110811880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110813515 110813693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110814968 110815016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110815131 110815209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110826442 110826512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110828041 110828130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110834126 110834240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110840746 110840752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGAAGAACTACAAAGCAATTGGCAAGATAGGAGAGGGGACGTTTTCTGAAGTTATGAAGATGCAGAGTC
TGAGAGATGGGAATTACTATGCGTGCAAACAAATGAAGCAGCACTTTGAAAGTATTGAGCAAGTGAACAG
TCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCACGAAGTAGTT
TTTGACAGAAAATCTGGTTCTCTTGCACTAATATGTGAACTTATGGACATGAATATTTATGAGCTAATAC
GAGGGAGAAGACACCCATTATCAGAGAAAAAGATTATGCTCTACATGTATCAGCTGTGCAAATCGCTGGA
CCACATGCACAGAAACGGGATCTTTCACAGAGACGTGAAGCCGGAGAATATCCTAGTAAAGCAGGATGTC
CTGAAACTAGGGGACTTCGGGTCATGCCGGAGTGTCTATTCCAAGCAGCCCTACACAGAGTACATCTCTA
CCCGGTGGTACCGGGCCCCAGAGTGTCTCCTCACCGACGGGTTCTACACATACAAGATGGACCTGTGGAG
CGCTGGCTGCGTGTTCTACGAGATTGCCAGCCTGCAGCCCCTCTTTCCTGGTGTGAATGAACTGGACCAG
ATCTCAAAAATCCATGATGTCATCGGCACACCTTGTCAGAAGACCCTCACTAAGTTCAAACAGTCGAGAG
CTATGAGTTTTGATTTTCCTTTTAAAAAGGGATCAGGAATACCTCTACTGACAGCCAATTTGTCCCCGCA
ATGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCTCACCAAGCCCTT
CAGCACCCCTATTTCCAGGTGCAGAGGGCAGCTGAGACACAGACCCTGGCCAAACACAGAAGAGCTTTCT
GTCCCAAGTTCTCCATGGTGCCAGAATCATCCAGTCACAACTGGTCATTCTCACAGGAAGGCAGAAAGCA
GAAACAGTCCCTGCGGCACGAGGAGGGCCATGCCAGACGACAGGGGCCGACCAGCTTGATGGAGCTTCCC
AAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCA
CTGGAGCAAATGGAAAAGTCCCTGTGCTGAGACCCCTGAAGTGTGCTGCTGTGAACAAGAAGACAGACAC
GCAGAAGGACATCAAACCTCACCTGAAACACTATCACCTGCCCACGATCAACAGGAAAGGGGGCGAATAC
TGA

Translation (420 aa):
MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQHFESIEQVNSLREIQALRRLNPHPNILALHEVV
FDRKSGSLALICELMDMNIYELIRGRRHPLSEKKIMLYMYQLCKSLDHMHRNGIFHRDVKPENILVKQDV
LKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQ
ISKIHDVIGTPCQKTLTKFKQSRAMSFDFPFKKGSGIPLLTANLSPQCLSLLHAMVAYDPDERIAAHQAL
QHPYFQVQRAAETQTLAKHRRAFCPKFSMVPESSSHNWSFSQEGRKQKQSLRHEEGHARRQGPTSLMELP
KLRLSGMTKLSSCSSPALRSVLGTGANGKVPVLRPLKCAAVNKKTDTQKDIKPHLKHYHLPTINRKGGEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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