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Report for CCDS31108.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31108.1 Public Homo sapiens 1 OR2M4 24 110 108 CCDS HistoryNCBI Gene:26245Re-query CCDS DB by CCDS ID:31108.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31108.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641868.1 ENSP00000492992.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641868.1Link to Ensembl Protein Viewer:ENSP00000492992.1Re-query CCDS DB by Nucleotide ID:ENST00000641868Re-query CCDS DB by Protein ID:ENSP00000492992
Original member Current member NCBI NM_017504.2 NP_059974.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017504.2Link to Protein Sequence:NP_059974.1Re-query CCDS DB by Nucleotide ID:NM_017504Re-query CCDS DB by Protein ID:NP_059974Link to BLAST:NP_059974.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_059974.1 311 Q96R27 311 100% 0 0

Chromosomal Locations for CCDS 31108.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248238929 248239864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGTGTGGGAAAACCAGACCTTCAACTCCATCTTCATCCTGCTGGGAATCTTCAATCACAGTCCCACCC
ACACCTTCCTTTTTTCTCTGGTCCTGGGCATCTTCTCACTGGCATTGATGGAAAATATTTCCATGGTTCT
CCTCATCTACATAGAGAAACAGCTCCACACCCCCATGTACTTCCTCCTCAGTCAACTGTCCCTTATGGAC
CTCATGCTCATCTGCACCACTCTACCCAAGATGATCTTCAGCTACTTGTCTGGGAAGAAATCTATCTCTC
TGGCAGGTTGTGGAACTCAGATATTCTTCTATGTGTCCCTGCTTGGAGCTGAATGTTTCTTGTTGGCTGT
CATGGCTTATGACCGCTATGTGGCTATATGTCACCCTCTTCAGTACACCATCCTCATGAATCCGAAACTC
TGTGTCTTCATGACTGTTGCTTCCTGGACCTTGGGGTCTCTTGATGGGATCATAGTGCTTGCAGCTGTCC
TGTCATTTTCTTACTGCAGCTCTCTGGAAATTCATCACTTTTTCTGTGATGTTGCTGCCCTTTTACCTCT
ATCCTGCACAGAAACATCTGCATTTGAAAGACTACTTGTCATTTGTTGTGTGGTAATGCTAATCTTTCCA
GTTTCAGTTATCATACTTTCCTATTCCCATGTCCTTCGAGCCGTCATCCACATGGGCTCTGGGGAAAGTC
GTCGCAAGGCCTTCACTACCTGCTCCTCCCACCTGTCTGTGGTCGGACTCTACTACGGTGCTGCTATGTT
CATGTACATGAGACCAGCTTCTAAACATACGCCAGACCAGGACAAGATGGTGTCGGCCTTCTACACTATT
CTCACCCCTATGCTGAACCCTCTCATTTATAGCCTCCGCAACAAAGAAGTGTTCAGGGCACTACAGAAGG
TACTGAAGAAAAGAAAGTTAATATGA

Translation (311 aa):
MVWENQTFNSIFILLGIFNHSPTHTFLFSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMD
LMLICTTLPKMIFSYLSGKKSISLAGCGTQIFFYVSLLGAECFLLAVMAYDRYVAICHPLQYTILMNPKL
CVFMTVASWTLGSLDGIIVLAAVLSFSYCSSLEIHHFFCDVAALLPLSCTETSAFERLLVICCVVMLIFP
VSVIILSYSHVLRAVIHMGSGESRRKAFTTCSSHLSVVGLYYGAAMFMYMRPASKHTPDQDKMVSAFYTI
LTPMLNPLIYSLRNKEVFRALQKVLKKRKLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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