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Report for CCDS9457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9457.1 Public Homo sapiens 13 FBXL3 24 110 108 CCDS HistoryNCBI Gene:26224Re-query CCDS DB by CCDS ID:9457.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9457.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355619.10 ENSP00000347834.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355619.10Link to Ensembl Protein Viewer:ENSP00000347834.5Re-query CCDS DB by Nucleotide ID:ENST00000355619Re-query CCDS DB by Protein ID:ENSP00000347834
Original member Current member NCBI NM_012158.4 NP_036290.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012158.4Link to Protein Sequence:NP_036290.1Re-query CCDS DB by Nucleotide ID:NM_012158Re-query CCDS DB by Protein ID:NP_036290Link to BLAST:NP_036290.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036290.1 428 Q9UKT7 428 100% 0 0

Chromosomal Locations for CCDS 9457.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 77007145 77007788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 77015409 77015580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 77018600 77018722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 77021513 77021860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1287 nt):
ATGAAACGAGGAGGAAGAGATAGTGACCGTAATTCATCAGAAGAAGGAACTGCAGAGAAATCCAAGAAAC
TGAGGACTACAAATGAGCATTCTCAGACTTGTGATTGGGGTAATCTCCTTCAGGACATTATTCTCCAAGT
ATTTAAATATTTGCCTCTTCTTGACCGGGCTCATGCTTCACAAGTTTGCCGCAACTGGAACCAGGTATTT
CACATGCCTGACTTGTGGAGATGTTTTGAATTTGAACTGAATCAGCCAGCTACATCTTATTTGAAAGCTA
CCCATCCAGAGCTGATCAAACAGATTATTAAAAGACATTCAAACCATCTACAATATGTCAGCTTCAAGGT
GGACAGCAGCAAGGAATCAGCTGAAGCAGCTTGTGATATACTATCGCAACTTGTGAATTGCTCTTTAAAA
ACACTTGGACTTATTTCAACTGCTCGACCAAGCTTTATGGATTTACCAAAGTCTCACTTTATCTCTGCAC
TGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGATAGATGATACTCCAGTAGATGATCC
ATCTCTCAAAGTACTAGTGGCCAACAATAGTGATACACTCAAGCTGTTGAAAATGAGCAGCTGTCCTCAT
GTCTCTCCAGCAGGTATCCTTTGTGTGGCTGATCAGTGTCACGGCTTAAGAGAACTAGCCCTGAACTACC
ACTTATTGAGTGATGAGTTGTTACTTGCATTGTCTTCTGAAAAACATGTTCGATTAGAACATTTGCGCAT
TGATGTAGTCAGTGAGAATCCTGGACAGACACACTTCCATACTATTCAGAAGAGTAGCTGGGATGCTTTC
ATCAGACATTCACCCAAAGTGAACTTAGTGATGTATTTTTTTTTATATGAAGAAGAATTTGACCCCTTCT
TTCGCTATGAAATACCTGCCACCCATCTGTACTTTGGGAGATCAGTAAGCAAAGATGTGCTTGGCCGTGT
GGGAATGACATGCCCTAGACTGGTTGAACTAGTAGTGTGTGCAAATGGATTACGGCCACTTGATGAAGAG
TTAATTCGCATTGCAGAACGTTGCAAAAATTTGTCAGCTATTGGACTAGGGGAATGTGAAGTCTCATGTA
GTGCCTTTGTTGAGTTTGTGAAGATGTGTGGTGGCCGCCTATCTCAATTATCCATTATGGAAGAAGTACT
AATTCCTGACCAAAAGTATAGTTTGGAGCAGATTCACTGGGAAGTGTCCAAGCATCTTGGTAGGGTGTGG
TTTCCCGACATGATGCCCACTTGGTAA

Translation (428 aa):
MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQVF
HMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKESAEAACDILSQLVNCSLK
TLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPH
VSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAF
IRHSPKVNLVMYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEE
LIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW
FPDMMPTW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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