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Report for CCDS20921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20921.1 Public Mus musculus 7 Vmn1r93 23 108 98 CCDS HistoryNCBI Gene:404290Re-query CCDS DB by CCDS ID:20921.1Re-query CCDS DB by GeneID:404290See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20921.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098747.1 ENSMUSP00000096343.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098747.1Link to Ensembl Protein Viewer:ENSMUSP00000096343.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098747Re-query CCDS DB by Protein ID:ENSMUSP00000096343
Original member Current member NCBI NM_207547.2 NP_997430.2 Accepted alive Link to Nucleotide Sequence:NM_207547.2Link to Protein Sequence:NP_997430.2Re-query CCDS DB by Nucleotide ID:NM_207547Re-query CCDS DB by Protein ID:NP_997430Link to BLAST:NP_997430.2

Chromosomal Locations for CCDS 20921.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 20138123 20139088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGTCTGTTCGTGGTAAATCCCTGAAAACCACTGAGGAAGTGGCTCTTCAGATCATTTTGCTTTGCCAGT
TTGGGGTTGGGACCATGGCCAATGTCTTCCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAA
ACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTGTA
TTTCCAAACAACATGATGGCTTTTGCTCCAAGAAATCCTCCAACTGAACTCAAATGTAAATTAAAATTCT
TCAGTCACCTGGTGACAAGAAGCACAAATTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCAT
TCTGGTTCCTATTAGTAGAGGTAAACTTCTACTCAGAGCAAGTGTCCCAAATTTGGTGAGTTATTCTTGT
TACGGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAAGGTCACTGGTCCACAGATAA
CAGACAATAACACTGACTCTAAAAGCAAGTTTTTCTGTTCCACTTCTGGATTCACTGTAAGAATTGTCTT
CTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAGTGTCTCCATGGTACTTCTC
CTCCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGT
CCAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTTAGCTTTTATCTTCTAAATTTTATTTG
TATCATCTTTCATACCTTTTTTATACATTATAATTTATTCATACGGCTTCTTGGTGAGATTTTGGCTGCA
GGTTTCCCTACTATTTCTCCCTTACTGTTGATCTTCAGAGATCCTAAGAATCCTTGTCTTGAGCTCTTCC
ACTGTTTTAAACCAGAGTCGCTACAAAATTTGAAACACAGAAGACAGCTTCACTAA

Translation (321 aa):
MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTV
FPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSC
YGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLL
LHRHRQRMQHILTPNQDARGQAESRATHTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAA
GFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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