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Report for CCDS13174.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13174.1 Public Homo sapiens 20 ZNF337 24 110 108 CCDS HistoryNCBI Gene:26152Re-query CCDS DB by CCDS ID:13174.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13174.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252979.6 ENSP00000252979.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252979.6Link to Ensembl Protein Viewer:ENSP00000252979.5Re-query CCDS DB by Nucleotide ID:ENST00000252979Re-query CCDS DB by Protein ID:ENSP00000252979
Original member Current member EBI ENST00000376436.5 ENSP00000365619.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376436.5Link to Ensembl Protein Viewer:ENSP00000365619.1Re-query CCDS DB by Nucleotide ID:ENST00000376436Re-query CCDS DB by Protein ID:ENSP00000365619
Original member Current member NCBI NM_001290261.2 NP_001277190.1 Accepted alive Link to Nucleotide Sequence:NM_001290261.2Link to Protein Sequence:NP_001277190.1Re-query CCDS DB by Nucleotide ID:NM_001290261Re-query CCDS DB by Protein ID:NP_001277190Link to BLAST:NP_001277190.1
Original member Current member NCBI NM_015655.4 NP_056470.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015655.4Link to Protein Sequence:NP_056470.1Re-query CCDS DB by Nucleotide ID:NM_015655Re-query CCDS DB by Protein ID:NP_056470Link to BLAST:NP_056470.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277190.1 751 Q9Y3M9-1 751 100% 0 0
NP_056470.1 751 Q9Y3M9-1 751 100% 0 0

Chromosomal Locations for CCDS 13174.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 25675032 25677037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25685567 25685662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25685996 25686122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25686391 25686417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2256 nt):
ATGGGACCTCAGGGAGCCAGGAGACAGGCTTTCTTGGCATTTGGGGATGTCACTGTGGATTTCACCCAGA
AGGAATGGAGGCTGCTGAGCCCTGCTCAGAGGGCCCTGTACAGGGAGGTGACACTGGAGAACTACAGCCA
CCTGGTCTCACTAGGAATTCTCCATTCTAAACCAGAACTCATCAGGCGGCTAGAGCAAGGGGAAGTGCCC
TGGGGAGAAGAGAGAAGACGCCGGCCAGGCCCCTGTGCAGGAATATATGCAGAACATGTCCTGCGGCCCA
AGAATCTTGGACTTGCACATCAGAGGCAACAGCAACTACAATTTTCTGATCAAAGCTTCCAGAGTGACAC
AGCTGAAGGTCAAGAGAAAGAAAAAAGCACTAAGCCCATGGCATTTTCCAGCCCACCCCTAAGACATGCA
GTAAGCTCAAGGAGGAGGAACAGTGTAGTGGAAATAGAGTCTAGTCAAGGCCAGAGGGAAAATCCTACAG
AAATAGACAAAGTATTGAAAGGAATAGAAAATTCAAGATGGGGAGCATTCAAGTGTGCAGAGCGTGGGCA
AGACTTCAGCCGGAAGATGATGGTAATCATACACAAAAAAGCACATTCCAGGCAGAAACTTTTTACATGC
AGGGAGTGTCACCAGGGCTTTAGAGATGAGTCAGCATTGCTCTTGCACCAGAACACACACACAGGAGAGA
AGTCCTATGTGTGCAGTGTGTGTGGGCGAGGCTTCAGCCTCAAGGCCAACCTCCTCAGACACCAGAGGAC
ACACTCAGGAGAGAAGCCTTTTCTGTGCAAGGTGTGTGGACGAGGCTATACCAGTAAGTCATACCTCACT
GTGCATGAGAGAACACACACAGGAGAGAAGCCTTATGAATGCCAGGAGTGTGGGCGAAGGTTTAACGATA
AGTCCTCATACAACAAGCACTTGAAGGCGCATTCAGGGGAGAAGCCTTTTGTGTGCAAGGAGTGTGGGCG
AGGCTATACTAATAAGTCATACTTCGTTGTGCACAAGAGAATACACTCAGGAGAGAAGCCTTACAGATGC
CAGGAGTGTGGCCGAGGCTTTAGCAATAAGTCACACCTTATCACACACCAGAGGACACACTCAGGGGAGA
AGCCCTTTGCGTGCAGGCAGTGTAAGCAAAGTTTTAGCGTGAAAGGAAGTCTCCTCAGACACCAGAGAAC
ACACTCAGGGGAGAAGCCTTTTGTGTGCAAGGATTGTGAGCGAAGCTTTAGCCAAAAGTCAACTCTTGTC
TACCACCAGAGAACACACTCAGGGGAGAAACCTTTTGTTTGTAGAGAATGTGGGCAAGGATTTATTCAGA
AGTCAACCCTTGTGAAACATCAGATCACACACTCAGAGGAGAAGCCTTTTGTGTGCAAGGACTGTGGACG
AGGCTTTATCCAAAAGTCAACCTTCACTTTACACCAGAGGACACACTCAGAGGAGAAGCCTTATGGATGT
CGGGAGTGTGGGCGAAGGTTTCGGGATAAGTCCTCCTATAACAAGCACCTGAGGGCACACTTGGGTGAGA
AACGTTTTTTCTGCAGGGATTGTGGGCGAGGCTTTACCTTGAAGCCAAATCTCACCATACATCAGAGGAC
ACACTCAGGAGAGAAGCCCTTCATGTGCAAGCAGTGTGAGAAAAGTTTTAGTTTGAAGGCAAATCTTCTT
AGACATCAGTGGACACACTCGGGGGAAAGGCCATTTAATTGCAAGGATTGCGGGCGAGGCTTCATCCTAA
AATCAACTCTCCTCTTCCACCAGAAGACACACTCAGGGGAGAAGCCTTTCATCTGTAGTGAATGTGGGCA
AGGATTTATCTGGAAGTCAAATCTTGTGAAACACCAGCTTGCACATTCTGGCAAGCAGCCTTTTGTATGC
AAGGAGTGTGGGCGAGGCTTCAACTGGAAGGGAAATCTCCTCACACACCAGAGGACACACTCAGGGGAGA
AGCCCTTCGTGTGTAATGTGTGTGGGCAAGGCTTCAGCTGGAAGAGAAGTCTCACCAGACACCACTGGCG
GATACACTCAAAGGAGAAGCCTTTTGTTTGCCAGGAGTGTAAGCGAGGCTATACCAGTAAGTCAGACCTC
ACTGTGCATGAAAGAATACACACAGGAGAGAGGCCTTATGAATGCCAAGAGTGTGGACGAAAGTTTAGCA
ATAAGTCATACTACAGTAAGCACTTAAAGAGACACTTACGTGAGAAGCGTTTTTGTACAGGGAGTGTGGG
TGAGGCTTCATCTTGA

Translation (751 aa):
MGPQGARRQAFLAFGDVTVDFTQKEWRLLSPAQRALYREVTLENYSHLVSLGILHSKPELIRRLEQGEVP
WGEERRRRPGPCAGIYAEHVLRPKNLGLAHQRQQQLQFSDQSFQSDTAEGQEKEKSTKPMAFSSPPLRHA
VSSRRRNSVVEIESSQGQRENPTEIDKVLKGIENSRWGAFKCAERGQDFSRKMMVIIHKKAHSRQKLFTC
RECHQGFRDESALLLHQNTHTGEKSYVCSVCGRGFSLKANLLRHQRTHSGEKPFLCKVCGRGYTSKSYLT
VHERTHTGEKPYECQECGRRFNDKSSYNKHLKAHSGEKPFVCKECGRGYTNKSYFVVHKRIHSGEKPYRC
QECGRGFSNKSHLITHQRTHSGEKPFACRQCKQSFSVKGSLLRHQRTHSGEKPFVCKDCERSFSQKSTLV
YHQRTHSGEKPFVCRECGQGFIQKSTLVKHQITHSEEKPFVCKDCGRGFIQKSTFTLHQRTHSEEKPYGC
RECGRRFRDKSSYNKHLRAHLGEKRFFCRDCGRGFTLKPNLTIHQRTHSGEKPFMCKQCEKSFSLKANLL
RHQWTHSGERPFNCKDCGRGFILKSTLLFHQKTHSGEKPFICSECGQGFIWKSNLVKHQLAHSGKQPFVC
KECGRGFNWKGNLLTHQRTHSGEKPFVCNVCGQGFSWKRSLTRHHWRIHSKEKPFVCQECKRGYTSKSDL
TVHERIHTGERPYECQECGRKFSNKSYYSKHLKRHLREKRFCTGSVGEASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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