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Report for CCDS52183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52183.1 Public Mus musculus 7 Dmkn 23 108 98 CCDS HistoryNCBI Gene:73712Re-query CCDS DB by CCDS ID:52183.1Re-query CCDS DB by GeneID:73712See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52183.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165887.7 ENSMUSP00000129031.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165887.7Link to Ensembl Protein Viewer:ENSMUSP00000129031.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165887Re-query CCDS DB by Protein ID:ENSMUSP00000129031
Original member Current member NCBI NM_001166173.1 NP_001159645.1 Accepted alive Link to Nucleotide Sequence:NM_001166173.1Link to Protein Sequence:NP_001159645.1Re-query CCDS DB by Nucleotide ID:NM_001166173Re-query CCDS DB by Protein ID:NP_001159645Link to BLAST:NP_001159645.1

Chromosomal Locations for CCDS 52183.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30763924 30764301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30764516 30764692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30764791 30764847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30765051 30765101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30765267 30765473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30766473 30766517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30767160 30767222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30767380 30767430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30769715 30769762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30771033 30771092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30771226 30771273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30771698 30771745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30775328 30775384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30776079 30776123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30777608 30777655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30777762 30777809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30778201 30778269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30779678 30779704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30779833 30779880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGAAGCTACAGGGCTCTCTGGCCTGCCTCCTGCTGGCCCTATGTCTGGGTGGTGGGGCAGCTAACCCGC
TGCACAGTGGAGGGGAGGGCACAGGGGCAAGTGCTGCCCATGGAGCAGGAGATGCCATTAGCCATGGAAT
TGGAGAGGCTGTGGGCCAAGGGGCTAAAGAAGCAGCCAGCTCTGGAATCCAGAATGCCCTAGGCCAGGGG
CACGGAGAGGAAGGTGGCTCCACATTGATGGGGAGCAGAGGCGATGTTTTTGAGCACCGGCTTGGGGAAG
CAGCAAGATCTCTGGGGAACGCTGGGAATGAGATTGGCAGACAGGCTGAGGATATCATTCGCCAAGGGGT
AGATGCTGTCCACAACGCTGGGTCCTGGGGGACATCTGGAGGTCATGGCGCATATGGCTCTCAAGGTGGT
GCTGGAGTCCAGGGCAATCCTGGTCCTCAAGGGACACCCTGGGCCTCAGGAGGCAACTATGGGACTAACT
CTCTGGGTGGCTCTGTGGGTCAGGGTGGCAATGGCGGACCACTCAACTATGAAACCAATGCCCAGGGAGC
TGTGGCTCAGCCTGGCTACGGGACAGTGAGAGGCAACAACCAGAACTCAGGGTGTACCAACCCCCCACCT
TCTGGCTCCCATGAAAGCTTCAGTAACTCTGGGGGAAGCAGCAATGATGGCAGTCGTGGTAGCCAAGGCA
GTCATGGCAGTAATGGTCAGGGCAGCAGCGGTAGAGGCGGTGGCCAAGGCAACAGCGACAACAATGGCAG
CAGTAGCAGTAGCAGCGGCAGCAACAGTGGCAACAGCAACAGTGGCAACAGCGGCAACAGCAACAGTGGC
AACAGCGGCAACAGCGGTTCTGGGTCCCGGGACATAGAAACATCTAATTTTGATGAAGGCTATTCGGTCT
CCAGGGGAACCGGCAGCAGGGGTGGAAGTGGTGGAAGTGGTGGAAGTGGTGGTGGAAACAAACCCGAGTG
TAACAACCCAGGGAATGATGTGCGCATGGCCGGAGGATCTGGGAGTCAGGAAAGTAAAGAAAGCAGTCAT
CTCCTTGGAGGCTCCCATGACTACCAGGGGCATGGGTCCAATGGTGGCAATATACAAAAAGAAGCTGTCA
ATGGACTCAACACTATGAACTCGGATGCATCTACCTTGCCCTTCAACATTGACAATTTCTGGGAGAATCT
TAAGTCCAAGACGCGCTTCATTAACTGGGATGCCATAAACAAGGGTCATGCCCCATCTCCCAGCACTCGG
GCTTTACTCTACTTCCGCAAACTGTGGGAGAATTTCAAACGCAGCACTCCTTTCTTCAACTGGAAACAGA
TTGAGGGTTCAGATCTGTCATCTCTGCAGAAGAGGGCAGGTGGAGCTGACCAGTTTTCTAAGCCTGAAGC
AAGACAAGATCTTTCAGCTGACTCATCCAAGAACTACTACAATAACCAGCAGGTGAATCCTACTTACAAC
TGGCAATACTATACCAAGACCACTGCCAAGGCGGGAGTCACACCTTCATCTTCCTCGGCTTCCCGGGCAC
AACCTGGCCTGCTGAAGTGGCTGAAGTTTTGGTAG

Translation (524 aa):
MKLQGSLACLLLALCLGGGAANPLHSGGEGTGASAAHGAGDAISHGIGEAVGQGAKEAASSGIQNALGQG
HGEEGGSTLMGSRGDVFEHRLGEAARSLGNAGNEIGRQAEDIIRQGVDAVHNAGSWGTSGGHGAYGSQGG
AGVQGNPGPQGTPWASGGNYGTNSLGGSVGQGGNGGPLNYETNAQGAVAQPGYGTVRGNNQNSGCTNPPP
SGSHESFSNSGGSSNDGSRGSQGSHGSNGQGSSGRGGGQGNSDNNGSSSSSSGSNSGNSNSGNSGNSNSG
NSGNSGSGSRDIETSNFDEGYSVSRGTGSRGGSGGSGGSGGGNKPECNNPGNDVRMAGGSGSQESKESSH
LLGGSHDYQGHGSNGGNIQKEAVNGLNTMNSDASTLPFNIDNFWENLKSKTRFINWDAINKGHAPSPSTR
ALLYFRKLWENFKRSTPFFNWKQIEGSDLSSLQKRAGGADQFSKPEARQDLSADSSKNYYNNQQVNPTYN
WQYYTKTTAKAGVTPSSSSASRAQPGLLKWLKFW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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