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Report for CCDS40063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40063.1 Public Mus musculus 7 Or51k1 23 108 98 CCDS HistoryNCBI Gene:259088Re-query CCDS DB by CCDS ID:40063.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106862.2 ENSMUSP00000102475.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106862.2Link to Ensembl Protein Viewer:ENSMUSP00000102475.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106862Re-query CCDS DB by Protein ID:ENSMUSP00000102475
Original member Current member EBI ENSMUST00000215653.1 ENSMUSP00000149743.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215653.1Link to Ensembl Protein Viewer:ENSMUSP00000149743.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215653Re-query CCDS DB by Protein ID:ENSMUSP00000149743
Original member Current member NCBI NM_147084.1 NP_667295.1 Accepted alive Link to Nucleotide Sequence:NM_147084.1Link to Protein Sequence:NP_667295.1Re-query CCDS DB by Nucleotide ID:NM_147084Re-query CCDS DB by Protein ID:NP_667295Link to BLAST:NP_667295.1

Chromosomal Locations for CCDS 40063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104011750 104012700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGGAGCAGAGAACAATGAAAGTCTTGACCTCCTATCAATCTTCCTAACTGGCATTCCAGGACTGGAGG
CCCAACATGGCTGGCTCTCCATTCCCTTTTTCATCATGTACATTGTTGCCATTGTGGGCAACAGCCTAAT
TATGATAGCAGTGCAGCAAGAGTCAGCTCTCCATGAGCCAATGTACCTGTTCCTCTCCATGCTGGCCATC
ACCGAGGTGGGAGTCTCTGTGTCCACACTGCCCACTGTTATGGGCATTCTTTGGTTTAATGCCTACAGAA
TTGACTTTGATGGCTGTTTGGCACAAATGTTCTTCATTCACACTTTCTCTGGCATGGAGTCAGGAGTCCT
ATTGGCCATGAGTTATGACCGCTTTGTAGCCATCTATAATCCTCTGCGCTATACAGCCATTCTAACTCTG
CCTCGGATCATATCCATGGGTCTGGGTATTACACTAAAGAGTGTTGCACTCATGGCCCCACTTCCAATTC
TTTTAAAACAACTACCATATTGTCACATAAATATTCTCTCCCATTCCTATTGCCTTCACTCAGACTTGAT
CCAACTGCCTTGTGCAGATACTAGGTTGAATAGCATCCTGGGGTTGGCCATTGTCCTGGCCACTTTTGGG
CTGGACTCATTACTCATTGTGGTCTCTTATGGGCTCATTCTTTACACAGTGATGGGTATTGCTTCTGGTG
AGGGTCGGAAGAAGACCCTCAACACATGTGTGTCACACATCTGTGCAGTGCTTATATATTATGTGCCTAT
GATTGGTGTGTCTGTGATGCATCGTGTTGCCAAGCATGCATCACCAGTGGTCCACACACTTATGTCGAGC
ATCTATCTGTTTGTGCCACCAGTGCTCAATCCTATCATATACAGTGTGAAAACCCGTCCAATCCAACAGG
GAATTGCCAACTTGTTCTCGTGCAAGAAGGGATCTATCTGA

Translation (316 aa):
MGAENNESLDLLSIFLTGIPGLEAQHGWLSIPFFIMYIVAIVGNSLIMIAVQQESALHEPMYLFLSMLAI
TEVGVSVSTLPTVMGILWFNAYRIDFDGCLAQMFFIHTFSGMESGVLLAMSYDRFVAIYNPLRYTAILTL
PRIISMGLGITLKSVALMAPLPILLKQLPYCHINILSHSYCLHSDLIQLPCADTRLNSILGLAIVLATFG
LDSLLIVVSYGLILYTVMGIASGEGRKKTLNTCVSHICAVLIYYVPMIGVSVMHRVAKHASPVVHTLMSS
IYLFVPPVLNPIIYSVKTRPIQQGIANLFSCKKGSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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