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Report for CCDS23015.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23015.1 Public Mus musculus 9 Or8b47 23 108 98 CCDS HistoryNCBI Gene:258873Re-query CCDS DB by CCDS ID:23015.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23015.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074987.2 ENSMUSP00000074515.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074987.2Link to Ensembl Protein Viewer:ENSMUSP00000074515.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000074987Re-query CCDS DB by Protein ID:ENSMUSP00000074515
Original member Current member EBI ENSMUST00000216496.1 ENSMUSP00000150446.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216496.1Link to Ensembl Protein Viewer:ENSMUSP00000150446.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216496Re-query CCDS DB by Protein ID:ENSMUSP00000150446
Original member Current member NCBI NM_146873.2 NP_667084.2 Accepted alive Link to Nucleotide Sequence:NM_146873.2Link to Protein Sequence:NP_667084.2Re-query CCDS DB by Nucleotide ID:NM_146873Re-query CCDS DB by Protein ID:NP_667084Link to BLAST:NP_667084.2

Chromosomal Locations for CCDS 23015.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38523734 38524669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGGGCTGGAAAATGGTTCTTTGGTGACTGAATTCATTCTACTGGGGTTAACAAATGATCCTGATCTCC
AGTTACCCCTGTTCCTACTCTTTCTGCTAATATACACAACAACAGCAGTGGGGAATTTGGCTTTGATCAC
TTTAATTGCACTGAATTCTCACCTTCACACCCCCATGTACTTTTTCCTTTTAAACTTGTCCTGCATTGAT
CTTTGTTATTCATCTGTAATTACACCCAAAATGCTGATGAACTTCTTAGTAAGGAAGAACATTATCTCCT
ACATGGGATGTATGACCCAGCTCTATTTCTTCTGTTTTTTTGCCATTTGTGAATGTTGTGTTCTGACATC
AATGGCCTATGATCGTTATGTGGCCATATGCAATCCACTCTTGTATAACATCACTATGTCTCCCAAGGTT
TGTTCCTATCTTATGCTTGGTTCATACATAATGGGATTTTCTGGTGCCATGATTCACACTGGATGCATTC
TGAGACTGACCTTCTGTGACAGGAACATCATCAACCACTATTTCTGTGATCTTTTCCCTCTGTTGCAGCT
CTCCTGTACCAGCACTTATGCCAATGAAATAGAGATTCTAATCGTAGGTGGTAAAGATATCATTGTGCCC
AGTGTTATCATCTTTACCTCTTATGGTTTCATTCTCTCAAATATCCTTCAAATGAGATCCACTGCAGGAA
TGTCCAAAGCATTTAGCACCTGTAGCTCCCATATACTTGCTGTTTCTTTATTCTTTGGCTCATGTGCATT
TATGTATCTTCAGCCCTCCTCACCTGGGTCTATGGATCAGGGAAAAGTCTCTTCTGTCTTCTATACCATT
GTGGTTCCCATGATGAACCCCTTAATCTATAGCTTTAGGAACAAGGATGTTAAAATTGCCCTGAGAAAAA
TCTTTGGCAAAAGGAGATTTTCATAA

Translation (311 aa):
MGLENGSLVTEFILLGLTNDPDLQLPLFLLFLLIYTTTAVGNLALITLIALNSHLHTPMYFFLLNLSCID
LCYSSVITPKMLMNFLVRKNIISYMGCMTQLYFFCFFAICECCVLTSMAYDRYVAICNPLLYNITMSPKV
CSYLMLGSYIMGFSGAMIHTGCILRLTFCDRNIINHYFCDLFPLLQLSCTSTYANEIEILIVGGKDIIVP
SVIIFTSYGFILSNILQMRSTAGMSKAFSTCSSHILAVSLFFGSCAFMYLQPSSPGSMDQGKVSSVFYTI
VVPMMNPLIYSFRNKDVKIALRKIFGKRRFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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