NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS23355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23355.1 Public Mus musculus 9 Elovl5 23 108 98 CCDS HistoryNCBI Gene:68801Re-query CCDS DB by CCDS ID:23355.1Re-query CCDS DB by GeneID:68801See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23355.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034904.13 ENSMUSP00000034904.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034904.13Link to Ensembl Protein Viewer:ENSMUSP00000034904.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034904Re-query CCDS DB by Protein ID:ENSMUSP00000034904
Original member Current member NCBI NM_134255.3 NP_599016.2 Accepted alive Link to Nucleotide Sequence:NM_134255.3Link to Protein Sequence:NP_599016.2Re-query CCDS DB by Nucleotide ID:NM_134255Re-query CCDS DB by Protein ID:NP_599016Link to BLAST:NP_599016.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_599016.2 299 Q8BHI7 299 100% 0 0

Chromosomal Locations for CCDS 23355.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 77957149 77957206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77960866 77961053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77975785 77975862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77976748 77976919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77979825 77979949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77981474 77981608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 77982665 77982808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGGAACATTTCGATGCGTCACTCAGTACCTATTTCAAGGCCTTCCTGGGCCCCCGAGATACAAGAGTCA
AAGGATGGTTCCTCCTGGACAATTACATCCCTACGTTTGTCTGTTCTGTTATTTACTTACTCATTGTATG
GCTGGGACCAAAATACATGAAGAACCGGCAGCCGTTCTCTTGCCGAGGCATCCTGCAGTTGTATAACCTT
GGACTCACCCTGCTGTCTCTCTACATGTTCTATGAGTTGGTGACAGGTGTGTGGGAAGGCAAATACAACT
TTTTCTGCCAGGGAACACGCAGCGCGGGAGAATCCGATATGAAGATCATCCGCGTCCTCTGGTGGTACTA
CTTCTCCAAACTCATCGAATTCATGGACACCTTTTTCTTCATCCTTCGCAAGAACAACCACCAGATCACC
GTGCTCCATGTCTACCACCACGCTACCATGCTCAACATCTGGTGGTTTGTGATGAACTGGGTTCCCTGCG
GCCATTCATATTTTGGTGCGACACTCAACAGCTTCATCCATGTCCTCATGTACTCGTACTATGGTCTGTC
CTCCATCCCGTCCATGCGTCCCTACCTCTGGTGGAAAAAGTACATCACTCAAGGGCAGCTGGTCCAGTTT
GTGCTGACAATCATCCAGACGACCTGCGGGGTCTTCTGGCCATGCTCCTTCCCTCTCGGGTGGCTGTTCT
TCCAGATTGGATACATGATTTCCCTGATTGCTCTCTTCACAAACTTCTACATTCAGACTTACAACAAGAA
AGGGGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACAC
ACCAACAGCTTCCCTTCCCTGGAAAACAGCGTGAAGCCCAGGAAGCAGCGAAAGGATTGA

Translation (299 aa):
MEHFDASLSTYFKAFLGPRDTRVKGWFLLDNYIPTFVCSVIYLLIVWLGPKYMKNRQPFSCRGILQLYNL
GLTLLSLYMFYELVTGVWEGKYNFFCQGTRSAGESDMKIIRVLWWYYFSKLIEFMDTFFFILRKNNHQIT
VLHVYHHATMLNIWWFVMNWVPCGHSYFGATLNSFIHVLMYSYYGLSSIPSMRPYLWWKKYITQGQLVQF
VLTIIQTTCGVFWPCSFPLGWLFFQIGYMISLIALFTNFYIQTYNKKGASRRKDHLKGHQNGSVAAVNGH
TNSFPSLENSVKPRKQRKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH