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Report for CCDS79469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79469.1 Public Mus musculus 16 Or5ac21 23 108 98 CCDS HistoryNCBI Gene:258479Re-query CCDS DB by CCDS ID:79469.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79469.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000215893.1 ENSMUSP00000149906.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215893.1Link to Ensembl Protein Viewer:ENSMUSP00000149906.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215893Re-query CCDS DB by Protein ID:ENSMUSP00000149906
Original member Current member NCBI NM_146486.2 NP_666697.2 Accepted alive Link to Nucleotide Sequence:NM_146486.2Link to Protein Sequence:NP_666697.2Re-query CCDS DB by Nucleotide ID:NM_146486Re-query CCDS DB by Protein ID:NP_666697Link to BLAST:NP_666697.2

Chromosomal Locations for CCDS 79469.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 59303155 59304075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGGAGGTGAACAGGACCCTGGTGACTGCGTTTATTCTCAGAGGAATAACAGATCTTCCAGAGCTGCAAG
TTCCCATGTTCTTGGTGTTCTTCTTCATCTATGTCACTACCATGGTGGGCAACCTTGGCTTGATCGTTCT
CATCTGGAAGGACCCTCGTCTTCACACACCCATGTACTTTTTCCTTGGAAGTTTAGCTTTTGCTGATGCC
TGTACTTCATCCTCAGTGACTCCCAGGATGCTTGTTAATATCTTAGACAATGGTAAGATGATTTCCCTCT
CTGAATGCATGGCCCAATATTATGTTTTTGGATCCAGTGCAACTACAGAATGTTTCCTTCTGGTAGCGAT
GGCCTATGACCGCTATGTAGCCATATGCAATCCTTTGCTCTATCTTGTGGTGATGTCCAACAGAGTGTGC
ACTTGCCTGATAAGTGGCTCATATATAATCGGTTTTCTGCATCCACTTATTCATGTAGGTCTACTATTTA
GATTAACCTTCTGCAAATCCAATATAATAGATCATTTTTACTGTGAGATCCTGCCACTCTATACAATTTC
TTGCACCGACCCATCTATTAATGCATTTGTGGTCTTCATTTTTGCTGCTGTGATACAAGCTGTTACCTTC
ATGAGTATTGCAGTCTCCTATGCCCACGTCCTCTTTTCCATCCTGAAAACAAAGTCTGAGAGGGGCAGAA
GAAAAGCCTTCTCCACCTGCAGTGCCCACCTACTCTCTGTCTCTCTGTTCTATGGAACTCTCTTCTTTAT
GTACGTGAGCCCTGGGTCTGGACCAAGTAAATATAAGAATAAGATGTATTCTCTGTTTTACACCATTGTG
ATTCCTCTACTAAACCCCTTCATTTACAGCTTAAGAAACAAGGAAGTTTTAGGGGCTCTGAGAAAAATCA
TGAAGCCATAA

Translation (306 aa):
MEVNRTLVTAFILRGITDLPELQVPMFLVFFFIYVTTMVGNLGLIVLIWKDPRLHTPMYFFLGSLAFADA
CTSSSVTPRMLVNILDNGKMISLSECMAQYYVFGSSATTECFLLVAMAYDRYVAICNPLLYLVVMSNRVC
TCLISGSYIIGFLHPLIHVGLLFRLTFCKSNIIDHFYCEILPLYTISCTDPSINAFVVFIFAAVIQAVTF
MSIAVSYAHVLFSILKTKSERGRRKAFSTCSAHLLSVSLFYGTLFFMYVSPGSGPSKYKNKMYSLFYTIV
IPLLNPFIYSLRNKEVLGALRKIMKP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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