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Report for CCDS23022.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23022.1 Public Mus musculus 9 Or8b3b 23 108 98 CCDS HistoryNCBI Gene:258372Re-query CCDS DB by CCDS ID:23022.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23022.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055099.1 ENSMUSP00000057210.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055099.1Link to Ensembl Protein Viewer:ENSMUSP00000057210.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000055099Re-query CCDS DB by Protein ID:ENSMUSP00000057210
Original member Current member NCBI NM_146375.2 NP_666487.2 Accepted alive Link to Nucleotide Sequence:NM_146375.2Link to Protein Sequence:NP_666487.2Re-query CCDS DB by Nucleotide ID:NM_146375Re-query CCDS DB by Protein ID:NP_666487Link to BLAST:NP_666487.2

Chromosomal Locations for CCDS 23022.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38672504 38673481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGAAATATTTTTGTCTGCCCAGATTTTCAATAATAAGCATGCTGACTGGAAATGGCTCCTTTGTGACTG
AGTTTGTCCTTGCTGGTTTGACAGATCGTCCAGAGCTCCAGCTGCCTCTCTTTTACCTGTTTCTAATAAT
CTACACTGTCACAGTGGTGGGAAACTTGGGCTTGATCATCCTGATTGGCCTCAATCCTCACCTGTACACC
CCCATGTACTATTTCCTCTTCAACCTCTCCTTCATTGATCTTTGCTACTCTTCTGTATCCAGTCCCAAGA
TGCTGATGAACTTTGTCTTTGAGAAGAATTCCATCTCCTATGAGGGGTGCATGACTCAGCTATTTTTCTT
CCTCTTTTTTGTTATCTCTGAATGCTACATGTTGACCTCAATGGCCTATGATCGCTATGTAGCCATCTGT
AATCCACTGCTGTATAAGGTCACCATGTCCCCACAGGTCTGCTCAATGCTATCATTTGCTTCTTATGGGA
TGGCATTTGCTGGAGCCTCTGCCCACACAGGCTGCATGCTCCGACTGATCTTCTGCAATGCCAATGTCAT
CAACTTTTATTTGTGTGACATTCTGCCCCTCCTCCAACTTTCTTGCACCAGCACCTATGTTAATGAAGTC
GTTGTTCTCATAGTTGTGGGTATTAACATCACAGTCCCCAGCTTCACCATCCTCATTTCCTATGTTTTCA
TCCTTGCCAACATTCTAAACATCAAATCCACACAAGGAAGATCAAAAGCCTTCAGCACCTGCAGCTCTCA
CATTATGGCAATTTCTCTGTTTTTTGGGTCAGGGGCATTCATGTATCTTAATCATTCTGGATCTATGAAC
CAGGGAAAAATTTCTTCTGTTTTCTACACTAATGTGGTTCCCATGTTCAACCCTCTGATCTACAGTTTGA
GGAACAAAGATGTGAAAATAGCACTGAAGAAAGTTATGATGAGAGTTCACAGCAGATTCATATCCTGA

Translation (325 aa):
MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYT
PMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAIC
NPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEV
VVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMN
QGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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