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Report for CCDS21648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21648.1 Public Mus musculus 7 Or52w1 23 108 98 CCDS HistoryNCBI Gene:258352Re-query CCDS DB by CCDS ID:21648.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21648.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000217827.1 ENSMUSP00000151295.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217827.1Link to Ensembl Protein Viewer:ENSMUSP00000151295.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217827Re-query CCDS DB by Protein ID:ENSMUSP00000151295
Original member Current member NCBI NM_146355.1 NP_666467.1 Accepted alive Link to Nucleotide Sequence:NM_146355.1Link to Protein Sequence:NP_666467.1Re-query CCDS DB by Nucleotide ID:NM_146355Re-query CCDS DB by Protein ID:NP_666467Link to BLAST:NP_666467.1

Chromosomal Locations for CCDS 21648.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 105368328 105369317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGAGACCCAAACTTCATCCTTACAGAATGGCAGAAAGTTCGCAGTCCAATTCTACCTTCCAACACCCAG
CTTTCTTTATATTGACTGGCATCCCAGCATTGGGAGATGGCCAGGCCTGGCTGTCCCTAGTGTTTGGGCT
CATGTATCTGCTGGCCCTACTAGGCAATGCAACACTCCTGACAGTAATCCGAATAGACTCTACATTGCAC
CAACCCATGTTTCTACTCCTGGCCACTCTGGCAGCTACTGACCTGGGCTTAGCCACATCTATAGCCCCAG
AGTTGCTGGCTGTGCTGTGGCTTGGACCCCAACCTGTACAATACACTGCCTGCCTAATCCAGATGTTCTT
TGTCCATGCACTGACTGCTATGGAATCTGGTGTGCTTTTGGCCATGGCCTGTGATCGGGCTGTGGCAGTG
GGGCGTCCACTACACTACCCTATCTTGGTAACTAAAGCCCGTGTGGGCTATGCAGTCCTGGCACTGACAC
TGAAAGTCCTGGCTGTTATAGTGCCTTTCCCTCTGCTGGTAGTACGATTTAAGCACTTTCATGCCAAGAT
CATACACCATGCCTATTGTGCACACATGGCAGTTGTAGAGCTGGTAGTTGGTAACACATGGGTCAACAAC
ATGTATGGGCTAGCACTTTCACTGGCTGTGTCTGGTGTAGATATTCTGGGCATTGCTGGATCTTATGGGC
TCATTGCCCATGCAGTACTTCGGCTACCTACCCAGGAGGCCCGAGTAAAGGCCTTTGGTACATGTAGTTC
TCACATCTGTGTCATCCTGGCCTTCTATGTGCCTGGTCTCTTCTCCTTCCTCACCCATCGCTTTGGTCGT
CACACTGTCCCAAAGCCAGTGCATATCCTTCTGTCCATCATCTATTTGCTGCTGCCACCTGCCCTCAACC
CCCTCATCTATGGGGTCCGCACCAAGCAGATTAGGGACCGATTCTTAGAAATGTTCAAATTCAGAAAAAA
GCAGTTTTAA

Translation (329 aa):
MRPKLHPYRMAESSQSNSTFQHPAFFILTGIPALGDGQAWLSLVFGLMYLLALLGNATLLTVIRIDSTLH
QPMFLLLATLAATDLGLATSIAPELLAVLWLGPQPVQYTACLIQMFFVHALTAMESGVLLAMACDRAVAV
GRPLHYPILVTKARVGYAVLALTLKVLAVIVPFPLLVVRFKHFHAKIIHHAYCAHMAVVELVVGNTWVNN
MYGLALSLAVSGVDILGIAGSYGLIAHAVLRLPTQEARVKAFGTCSSHICVILAFYVPGLFSFLTHRFGR
HTVPKPVHILLSIIYLLLPPALNPLIYGVRTKQIRDRFLEMFKFRKKQF


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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