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Report for CCDS21644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21644.1 Public Mus musculus 7 Or52l1 23 108 98 CCDS HistoryNCBI Gene:258160Re-query CCDS DB by CCDS ID:21644.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21644.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051355.6 ENSMUSP00000061561.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051355.6Link to Ensembl Protein Viewer:ENSMUSP00000061561.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000051355Re-query CCDS DB by Protein ID:ENSMUSP00000061561
Original member Current member NCBI NM_001011857.1 NP_001011857.1 Accepted alive Link to Nucleotide Sequence:NM_001011857.1Link to Protein Sequence:NP_001011857.1Re-query CCDS DB by Nucleotide ID:NM_001011857Re-query CCDS DB by Protein ID:NP_001011857Link to BLAST:NP_001011857.1

Chromosomal Locations for CCDS 21644.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 105180361 105181311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCTCTTAGCAATTCTAGCTGGAGGCAGCCCCAGCCCCCTTTCTTCCTAGTAGGTGTTCCAGGCTTGG
AGGAAAGTCAGCACTGGATAGCATTGCCCCTGGGTATCCTTTACCTCTTTGCTCTAGTGGGCAATGTGAC
TATCATCTTCATTATCTGGACTGATTCATCCTTACACCAACCTATGTACCTCTTCCTGGCCATGCTTGCT
GCTATTGACCTGGTCCTGGCCTCTTCCACTGCACCCAAAGCCCTCACTGTGCTCCTGGCTCATGCCCATG
AGATTGGGTACATTGTATGCCTGACTCAGATGTTCTTTATTCATGCCTTCTCCTCTATGGAGTCAGGCAT
ACTTGTAGCCATGGCTCTGGATCGCTATGTTGCCATCTGCCACCCTCTGCGTCATTCCACCATCCTGCAT
CCAGGGATTATAGGGCGCATTGGGCTGGTAGTACTGGTGCGGGGATTGGTCCTTCTTTTCCCATTCCCCA
TTCTGTTGCAGAATGTTGTCTTCTGCAGAGCAACTGTCATAAGCCATGCCTATTGTGAGCATATGGCTGT
GGTAAAACTTGCCTGTTCTGAAACCACAGTGAATCGAGCTTATGGTCTGTCAGTGGCACTGCTGGTGGTA
GGACTAGATGTCCTGGCCATTGGCATTTCCTATGCCCTCATCCTCCAGGCAGTGCTGAAGGTGCCAGGGG
GTGAAGCCAGACTTAAAGCCTTCAGTACATGTGGGTCTCATGTTTGTGTTATTCTCATCTTCTATGTCCC
TGGAATGTTCTCCTTCCTCACTCACCGCTTTGGCCACCATGTTCCCCATCATGTCCATGTTCTGCTGGCC
ACTCTCTATCTCCTTGTGCCACCTGCCCTGAATCCTCTTGTTTATGGGGTGAAGACTCGACAGATTCGCC
AGCGAGTGCTCAGGGTGTTCTACACAAAAGCATCGATTTGA

Translation (316 aa):
MALSNSSWRQPQPPFFLVGVPGLEESQHWIALPLGILYLFALVGNVTIIFIIWTDSSLHQPMYLFLAMLA
AIDLVLASSTAPKALTVLLAHAHEIGYIVCLTQMFFIHAFSSMESGILVAMALDRYVAICHPLRHSTILH
PGIIGRIGLVVLVRGLVLLFPFPILLQNVVFCRATVISHAYCEHMAVVKLACSETTVNRAYGLSVALLVV
GLDVLAIGISYALILQAVLKVPGGEARLKAFSTCGSHVCVILIFYVPGMFSFLTHRFGHHVPHHVHVLLA
TLYLLVPPALNPLVYGVKTRQIRQRVLRVFYTKASI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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