NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84423.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84423.1 Public Mus musculus 19 Or4d10 23 108 98 CCDS HistoryNCBI Gene:258155Re-query CCDS DB by CCDS ID:84423.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84423.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000214918.1 ENSMUSP00000151154.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214918.1Link to Ensembl Protein Viewer:ENSMUSP00000151154.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214918Re-query CCDS DB by Protein ID:ENSMUSP00000151154
Original member Current member NCBI NM_001011853.1 NP_001011853.1 Accepted alive Link to Nucleotide Sequence:NM_001011853.1Link to Protein Sequence:NP_001011853.1Re-query CCDS DB by Nucleotide ID:NM_001011853Re-query CCDS DB by Protein ID:NP_001011853Link to BLAST:NP_001011853.1

Chromosomal Locations for CCDS 84423.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12073695 12074630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGAAAACTATACCAGGGTGAAAGAACTTATTTTCCTTGGCCTGACCCAAAGTCAAGAAGTGAGCATGG
TGCTCTTTCTTTTCCTTCTCCTGGTGTATGTGACAACTCTGCTGGGGAACCTTCTCATCATGGTCACAGT
GACCTGTGAGTCTCGCCTTCACACCCCCATGTATTTCTTGCTCAGGAATTTGTCTGTTGCTGATATCTGC
TTTTCCTCCATCACTGCCCCCAAGGTTCTGGTGGACCTTCTCTCAGACAGAAAGACCATCTCTTTCAATG
GCTGTCTCACTCAGATGTTCTTCTTCCACCTTATTGGGGGAGTGGATGTGTTTTCTCTGTCTGTGATGGC
TCTAGATCGATATGTGGCCATCTCTAAGCCCTTGCACTATGTGACCATCATGAGCAGAGGCCGTTGCATT
GGGTTAATAGTGGCCTCCTGGGTGGGGGGCTTTGCCCACTCCATAGTGCAGATTTCTCTCTTGCTGACAC
TTCCATTCTGTGGACCCAATGTTCTTGATACTTTCTACTGTGATGTCCCCCAGGTCATCAAACTTGCCTG
CACAGACATCTTTGTTCTTGAGCTGCTGATGATTTCCAATAATGGAATGCTCACCACACTATGGTTTTTC
TTGTTACTGGTGTCCTACATGGTCATATTATTATTGCTGAAGTCTCAATCAGGAGAGGGCAAGAAGAAAG
CCATCTCTACCTGCACCTCCCACATCACTGTGATCACCCTGCACTTTGTGCCCTGCATCTATGTCTATGC
CAGGCCCTTCACTGCCCTCCCCACGGATAAAGCCATCTCTGTCACCTTTACAGTCATCTCCCCTCTGTTG
AACCCCTTGATCTACACTCTAAGGAACCAGGAAATGAAGTCAGCCATGAGGAGACTCAGGAAAAGACTTG
GACCTTCTTATTGGATAGAGAGGTAA

Translation (311 aa):
MENYTRVKELIFLGLTQSQEVSMVLFLFLLLVYVTTLLGNLLIMVTVTCESRLHTPMYFLLRNLSVADIC
FSSITAPKVLVDLLSDRKTISFNGCLTQMFFFHLIGGVDVFSLSVMALDRYVAISKPLHYVTIMSRGRCI
GLIVASWVGGFAHSIVQISLLLTLPFCGPNVLDTFYCDVPQVIKLACTDIFVLELLMISNNGMLTTLWFF
LLLVSYMVILLLLKSQSGEGKKKAISTCTSHITVITLHFVPCIYVYARPFTALPTDKAISVTFTVISPLL
NPLIYTLRNQEMKSAMRRLRKRLGPSYWIER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH