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Report for CCDS28756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28756.1 Public Mus musculus 17 Or14j9 23 108 98 CCDS HistoryNCBI Gene:258096Re-query CCDS DB by CCDS ID:28756.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28756.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085548.3 ENSMUSP00000082684.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085548.3Link to Ensembl Protein Viewer:ENSMUSP00000082684.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000085548Re-query CCDS DB by Protein ID:ENSMUSP00000082684
Original member Current member EBI ENSMUST00000208832.1 ENSMUSP00000146666.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208832.1Link to Ensembl Protein Viewer:ENSMUSP00000146666.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208832Re-query CCDS DB by Protein ID:ENSMUSP00000146666
Original member Current member EBI ENSMUST00000213274.1 ENSMUSP00000150904.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213274.1Link to Ensembl Protein Viewer:ENSMUSP00000150904.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213274Re-query CCDS DB by Protein ID:ENSMUSP00000150904
Original member Current member NCBI NM_001013575.5 NP_001013593.2 Accepted alive Link to Nucleotide Sequence:NM_001013575.5Link to Protein Sequence:NP_001013593.2Re-query CCDS DB by Nucleotide ID:NM_001013575Re-query CCDS DB by Protein ID:NP_001013593Link to BLAST:NP_001013593.2

Chromosomal Locations for CCDS 28756.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 37563347 37564309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGATAGTGGAAAATATAACCACAATGAGAGGATTCCTCCTCATGGGATTCTCTGACAACCATGAGCTGC
AGATCGTACAGGCTGTGCTCTTCTTGGTGACATACCTAGTCGGCTCAGCAGGGAACGTCATCATTATCAC
CATCACAACACTAGACCCACAGCTCCAGTCTCCAATGTATTACTTTCTGAAGCACCTTTCCATTCTGGAC
CTCTCATCCCTCTCTGTCACAGTTCCCCAGTATGTTGACAGTTCCCTGGCACAAAGTGGCTACATTTCAT
ATGCACAGTGCATGCTGCAGATTTTTTTCTTCACAGCTTTTGCCTGGGGTGAGCTGGCCATTCTCACAGT
GATGTCTTATGACCGCTATGTGGCCATCTGCCTCCCATTGCACTATGAGGTCATCATGAGTCCCAGAAAG
TGCACTTGGGCTGTGGCAACTGTGTGGCTAAGTGGAGGTATCTCAGGAACATTGTACATAACAGGTACAC
TCTTTATCAGATTCTGTGGGGACAAAATTATTCACCAGTTCTTCTGTGATGTCCCCCAGTTGCTCAAGCT
CTCCTGCTCTAATGACCACCTTGTAATAATGGACATGGTTAGTTTCCTGACTGCAGTTTCCTTTGCCTGT
TTCACTGGGATTGTCATCTCCTATGTCCACATATTCTCCACAGTTCTCAGGATGCCCTCTGCTGAAAGCA
GGTCTAAGGTCTTCTCTACTTGCCTGCCCCATCTTTTTGTTGTCTCATTGTTTCTTTCTACAGGCGCCTT
TGCATATCTAAACCTAACCTCAGACTCTTCAACTGCTTTAGAGTTCTTGCTCTCTATCTTTTACACAGTA
CTACCTCCAACTCTCAACCCTGTTATTTATAGTCTGAGAAATGAGACGATAAAGAATGTTGTAAGGAAGT
TACTGTTGAGCACAAAATTCACTGTTAGAATCATTTTTTCCTGTTGTTTCTGA

Translation (320 aa):
MIVENITTMRGFLLMGFSDNHELQIVQAVLFLVTYLVGSAGNVIIITITTLDPQLQSPMYYFLKHLSILD
LSSLSVTVPQYVDSSLAQSGYISYAQCMLQIFFFTAFAWGELAILTVMSYDRYVAICLPLHYEVIMSPRK
CTWAVATVWLSGGISGTLYITGTLFIRFCGDKIIHQFFCDVPQLLKLSCSNDHLVIMDMVSFLTAVSFAC
FTGIVISYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVSLFLSTGAFAYLNLTSDSSTALEFLLSIFYTV
LPPTLNPVIYSLRNETIKNVVRKLLLSTKFTVRIIFSCCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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