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Report for CCDS23759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23759.1 Public Mus musculus 10 2310057J18Rik 23 108 98 CCDS HistoryNCBI Gene:67719Re-query CCDS DB by CCDS ID:23759.1Re-query CCDS DB by GeneID:67719See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23759.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015663.6 ENSMUSP00000015663.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015663.6Link to Ensembl Protein Viewer:ENSMUSP00000015663.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000015663Re-query CCDS DB by Protein ID:ENSMUSP00000015663
Original member Current member NCBI NM_026336.3 NP_080612.1 Accepted alive Link to Nucleotide Sequence:NM_026336.3Link to Protein Sequence:NP_080612.1Re-query CCDS DB by Nucleotide ID:NM_026336Re-query CCDS DB by Protein ID:NP_080612Link to BLAST:NP_080612.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080612.1 337 Q8C6C9 337 100% 0 0

Chromosomal Locations for CCDS 23759.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 28972579 28972679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 28973850 28974088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 28981486 28981586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 28982421 28982605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 28983928 28984014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 28985992 28986292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGCTGTCCTGGCTTCCTGGGTCTGGGTACTGGCTGGCTGCTTCTGTGCAGCTGTAGCAGAGGTTTCTG
ATAGCTCAGATCCATATCCTCCTTTATGGGAAGACAGCCCTGAGCAGTTGAGTGACTACATGATGGAGGA
TGGGAACTACATAATTAATCCTTGGGTATACACTGACAGAATGGGGATGTACAGAATCTTACTGGAAGAG
ACAGCTATGTATTTTGCAAAATATGGTCCAGAAAATGAACAAAATCTTCTTTGGGGATTGCCTCTGCAGT
TTGGCTGGCAGTATCAATCAGGTAGATTAGCTGATCCCACTGGAATGACAGACTGTGGCAATGAACTTAA
TGAGAGTCTGTGTGTCTCTGTGGACAGTTGGTGGGCAGATATAAATTATTATCTGAGTGTGATACCTTTC
CTTGCTGCTGTTGATTCTGGAATAACAGGAATATCACCAAACCAAATCACGATCCTGCCTCCACCCAAGG
ATCAGATGAGGTTTTGTTATAATGTTTCTGACTGTCAATCTGCCGTCCCTGGAACAATGAACAGATGGAG
AGACTTTTTTCAGTACATGCAGTTGAATTCCAGTGACTTTGATGGCCTTCTTAACTACTTATGGGAAGCC
CATGCCTCATCCTTGGACTATCCCACCAGTGCCTTTGGAGACAGATATAATTTCTATTCTGAAAAAGAAG
CAAATTTTGAGGAAAACTGGGCTATTGCTGTGAACTATTTAGCGGCAGCCCGTCTTCCTACAACCCAAAA
TAGAACATACAGCTTTCAGAGGGGCCTGCCCCCACGAGTCCTTGTTGATACTGACATAGCCCCTTTTATT
CCTGACTTCACTCCTCTTCAGAACGAAGTCCTGGTATCACTCAAACTTCTTGGTGATACTGACAGAAATT
CAGGATCATTATCTTTGACTCTATGGGAAAATCTCATGAGTACAAAACTTGCAAGAACATTATTTCTAAA
AGCCTTTGAAGAGTTCCTGGCAACATCTTCTTAA

Translation (337 aa):
MAVLASWVWVLAGCFCAAVAEVSDSSDPYPPLWEDSPEQLSDYMMEDGNYIINPWVYTDRMGMYRILLEE
TAMYFAKYGPENEQNLLWGLPLQFGWQYQSGRLADPTGMTDCGNELNESLCVSVDSWWADINYYLSVIPF
LAAVDSGITGISPNQITILPPPKDQMRFCYNVSDCQSAVPGTMNRWRDFFQYMQLNSSDFDGLLNYLWEA
HASSLDYPTSAFGDRYNFYSEKEANFEENWAIAVNYLAAARLPTTQNRTYSFQRGLPPRVLVDTDIAPFI
PDFTPLQNEVLVSLKLLGDTDRNSGSLSLTLWENLMSTKLARTLFLKAFEEFLATSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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