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Report for CCDS30033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30033.1 Public Mus musculus X Maoa 23 108 98 CCDS HistoryNCBI Gene:17161Re-query CCDS DB by CCDS ID:30033.1Re-query CCDS DB by GeneID:17161See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30033.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026013.5 ENSMUSP00000026013.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026013.5Link to Ensembl Protein Viewer:ENSMUSP00000026013.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000026013Re-query CCDS DB by Protein ID:ENSMUSP00000026013
Original member Current member NCBI NM_173740.3 NP_776101.3 Accepted alive Link to Nucleotide Sequence:NM_173740.3Link to Protein Sequence:NP_776101.3Re-query CCDS DB by Nucleotide ID:NM_173740Re-query CCDS DB by Protein ID:NP_776101Link to BLAST:NP_776101.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776101.3 526 Q64133 526 100% 0 0

Chromosomal Locations for CCDS 30033.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 16619841 16619913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16634182 16634276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16639064 16639201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16658568 16658672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16659445 16659536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16662317 16662458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16664651 16664800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16665652 16665811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16672847 16672943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16677555 16677608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16680814 16680871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16682201 16682298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16683964 16684075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16684982 16685044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16685232 16685375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGACGGATCTGGAGAAGCCCAGTATCACAGGCCACATGTTCGACGTAGTCGTGATTGGAGGCGGCATCT
CAGGATTGGCTGCTGCCAAACTATTGTCAGAATACAAAATTAATGTCTTGGTTCTGGAAGCCCGGGATAG
AGTTGGAGGAAGAACATATACTGTGAGGAATGAGCATGTTAAATGGGTAGATGTTGGTGGAGCTTATGTG
GGACCAACCCAGAACAGAATCTTACGCTTGTCTAAGGAGCTAGGCATAGAGACCTATAAAGTGAATGTCA
ATGAGCGTCTAGTTCAATATGTCAAGGGGAAAACTTACCCATTCCGTGGTGCATTTCCACCTGTGTGGAA
CCCCTTGGCATATTTGGATTACAACAACCTGTGGAGGACAATGGATGATATGGGAAAAGAGATCCCTGTT
GATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTCATTGATAAAA
TCTGTTGGACAAAAACTGCTCGAGAATTTGCTTATCTTTTTGTGAACATTAATGTGACTTCTGAGCCTCA
TGAGGTATCTGCCCTGTGGTTCTTGTGGTATGTGAGGCAGTGTGGAGGTACCTCTCGGATATTCTCAGTC
ACCAATGGCGGCCAGGAACGGAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCC
TTGGGGATAAAGTGAAGCTGAGCTCTCCTGTTACTTATATTGACCAAACAGATGACAACATCATTATAGA
AACACTGAATCATGAGCACTATGAGTGCAAATATGTAATTAGTGCCATCCCACCGGTTTTGACTGCCAAG
ATCCACTTTAAACCAGAGCTTCCACCTGAGAGAAACCAATTAATTCAGCGTCTTCCAATGGGGGCTGTCA
TCAAGTGCATGGTGTATTACAAGGAAGCCTTCTGGAAGAAAAAGGACTATTGTGGCTGCATGATAATTGA
AGATGAGGAGGCTCCAATTTCAATCACTCTGGATGACACTAAACCAGATGGGTCAATGCCTGCCATCATG
GGCTTCATACTTGCCCGGAAAGCTGAACGACTTGCTAAACTACATAAAGACATAAGGAAGAGGAAAATCT
GTGAGCTGTATGCCAAAGTTCTGGGATCTCAAGAAGCTTTATCTCCCGTCCATTATGAAGAGAAGAACTG
GTGTGAGGAGCAGTACTCCGGGGGCTGCTACACAGCCTACTTCCCTCCTGGTATCATGACTCTGTATGGA
AGGGTGATTCGGCAGCCAGTAGGCAGGATTTACTTTGCAGGCACAGAGACAGCAACACAGTGGAGTGGCT
ACATGGAAGGTGCAGTTGAAGCTGGAGAACGAGCAGCTAGAGAGGTCTTGAATGCTCTAGGAAAAGTTGC
CAAGAAGGATATATGGGTTCAAGAGCCTGAGTCCAAGGATGTTCCAGCTCTTGAAATTACCCACACCTTC
TTAGAGAGGAACCTGCCTTCCGTGCCTGGTCTGCTCAAGATCACTGGTTTTTCCACTTCTGTGGCTCTTC
TCTGCTTTGTATTGTACAAGTTTAAACAGCCCCAGTCCTGA

Translation (526 aa):
MTDLEKPSITGHMFDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGGRTYTVRNEHVKWVDVGGAYV
GPTQNRILRLSKELGIETYKVNVNERLVQYVKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDDMGKEIPV
DAPWQARHAEEWDKITMKDLIDKICWTKTAREFAYLFVNINVTSEPHEVSALWFLWYVRQCGGTSRIFSV
TNGGQERKFVGGSGQISEQIMVLLGDKVKLSSPVTYIDQTDDNIIIETLNHEHYECKYVISAIPPVLTAK
IHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAFWKKKDYCGCMIIEDEEAPISITLDDTKPDGSMPAIM
GFILARKAERLAKLHKDIRKRKICELYAKVLGSQEALSPVHYEEKNWCEEQYSGGCYTAYFPPGIMTLYG
RVIRQPVGRIYFAGTETATQWSGYMEGAVEAGERAAREVLNALGKVAKKDIWVQEPESKDVPALEITHTF
LERNLPSVPGLLKITGFSTSVALLCFVLYKFKQPQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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