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Report for CCDS49965.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49965.1 Public Mus musculus 17 Zfp97 23 108 98 CCDS HistoryNCBI Gene:22759Re-query CCDS DB by CCDS ID:49965.1Re-query CCDS DB by GeneID:22759See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49965.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000147630.1 ENSMUSP00000114301.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000147630.1Link to Ensembl Protein Viewer:ENSMUSP00000114301.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000147630Re-query CCDS DB by Protein ID:ENSMUSP00000114301
Original member Current member NCBI NM_011765.5 NP_035895.3 Accepted alive Link to Nucleotide Sequence:NM_011765.5Link to Protein Sequence:NP_035895.3Re-query CCDS DB by Nucleotide ID:NM_011765Re-query CCDS DB by Protein ID:NP_035895Link to BLAST:NP_035895.3

Chromosomal Locations for CCDS 49965.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17121508 17121537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17142736 17142862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17143105 17143165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17144459 17145881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGATGAGGATATTGTCACTTCCCACAGAGAACGCAGTGACGTACTATGATGTCCTGGTGAGCTTTACTC
AGGAAGAATGGGCTTTGCTGGATCCTTCCCAGAAGAGTCTCTACAAAGATGTGATGCTCGAAACCTATAG
GAACCTCACTGCCATAGGCTATAACTGGGAAGAAGATAATATTGAAGAAGATTGTGAAAATTCTGGAAGA
CCCACTAGGCATCTTCAAAGGGATGGACCAAGTAATACTGGAGAGAAACCCTTTGAATGTATTCAATATG
ATGGAGCCTTTGCAAGAAACCATCATCAGTTACATAAGGACACTGGATCTTTCATGTCTTATACTGATCG
TCAAATACATAGAAGACCACACACTGAAGAAAAAGTCTATGATGGTAACCAATGTGGTAAAACCTTTTCA
TGTCACAACCATTTTGAAATCCGTAAAGGAACATATACTGGAGAAAAACCCTATGAATGTAATCAATGTG
GGAAAGCCTTTGCACGCAACAGCAATCTTCTAGACCATAAAAGAATACATACTGGAGAGAAACCCTATAA
ATGTAAGCAATGTGGCAAAGACTTTACCCATCACAGTACTCTTCATATCCATAAAAGAATACATACTAGA
GAGAAAACCTATAAATGTAACCAGTGTATGACCATTGCTCATCTTCAATGTCATAAAATAACACATACTG
GAGAGAAACTCTGTGAATATAACCAATGTTGGAAAGCCTTTGCATATCACAAAACTCTTCAAATCCATGA
AAGAACACATACTGGAGAAAAACTCTATCAATGTAACCAATGTGCCAAAGCCTTTCCATATCACAGAACT
CTTCAAATCCATGAAAGAACACATACTGGAGAGAAACCATATGAATGTAATCAATGTGGCAAAGCCTTTG
CATGTCTTAGAAATCTTCAAAATCATAAAACAACACATACTGGAGAGAAACCCTATGAATGTAACCAGTG
TGGCAGAGCCTTTAGACAATATGTTTATCTTCAGTGTCATGAAAGAATACATACTCGAGAGAAACCCTTT
GAATGTAATCAATGTGGCAAAGCCTTTGCACATCACAGCACTCTTCAAAGACATAAAAGAACACATACTG
GAGAGAAACCCTATGAATGTAATCAATGTGGCAAAGCCTTTGCATGTCCCAGATACCTTCAAATCCATAA
AAGAACACATACTGGAGAGAAACCCTATGAATGTAATCAATGTGGCAAAGCCTTTGCTTGTTACCAATCT
TTTCAAATCCATAAAAGAACACATACTGGAGAGAAACCCTATGAATGTAATCAATGTGGAAAAGCCTTTG
CATGTAACAGATACCTTCAAATCCATAAAAGAACACATACTGGAGAGAGACCTTATGAATGTAATCAGTG
TGGCAAGGCCTTTACATGTCGCAGTAATCTTCAAATCCATAAAAGAACACATACTGGAGAGAAACCCTAT
GAATGTAACCAGTGTGGCAAAGCCTTTACACAATTTTTTCCTCTTAAACGTCATGAAATAACACATACCA
AAGAGAAACCCTATGAATGTAACCAGTGTGGCAAAGCCTTTACACGCCACAGTACTCTTCAAATCCATAA
AAGAACACATACTGGAGAAAAACCCGTATGA

Translation (546 aa):
MMRILSLPTENAVTYYDVLVSFTQEEWALLDPSQKSLYKDVMLETYRNLTAIGYNWEEDNIEEDCENSGR
PTRHLQRDGPSNTGEKPFECIQYDGAFARNHHQLHKDTGSFMSYTDRQIHRRPHTEEKVYDGNQCGKTFS
CHNHFEIRKGTYTGEKPYECNQCGKAFARNSNLLDHKRIHTGEKPYKCKQCGKDFTHHSTLHIHKRIHTR
EKTYKCNQCMTIAHLQCHKITHTGEKLCEYNQCWKAFAYHKTLQIHERTHTGEKLYQCNQCAKAFPYHRT
LQIHERTHTGEKPYECNQCGKAFACLRNLQNHKTTHTGEKPYECNQCGRAFRQYVYLQCHERIHTREKPF
ECNQCGKAFAHHSTLQRHKRTHTGEKPYECNQCGKAFACPRYLQIHKRTHTGEKPYECNQCGKAFACYQS
FQIHKRTHTGEKPYECNQCGKAFACNRYLQIHKRTHTGERPYECNQCGKAFTCRSNLQIHKRTHTGEKPY
ECNQCGKAFTQFFPLKRHEITHTKEKPYECNQCGKAFTRHSTLQIHKRTHTGEKPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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