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Report for CCDS51674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51674.1 Public Mus musculus 5 Fbxo24 23 108 98 CCDS HistoryNCBI Gene:71176Re-query CCDS DB by CCDS ID:51674.1Re-query CCDS DB by GeneID:71176See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51674.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031732.13 ENSMUSP00000031732.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031732.13Link to Ensembl Protein Viewer:ENSMUSP00000031732.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031732Re-query CCDS DB by Protein ID:ENSMUSP00000031732
Original member Current member NCBI NM_027708.1 NP_081984.1 Accepted alive Link to Nucleotide Sequence:NM_027708.1Link to Protein Sequence:NP_081984.1Re-query CCDS DB by Nucleotide ID:NM_027708Re-query CCDS DB by Protein ID:NP_081984Link to BLAST:NP_081984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081984.1 589 Q9D417 589 100% 0 0

Chromosomal Locations for CCDS 51674.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 137612757 137613119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137613673 137613843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137618384 137618515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137618720 137618907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137619585 137619743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137621206 137621440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137621774 137622012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137624220 137624403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137624493 137624588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137624939 137624941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGGTGAAGCGCAGCTGCCCTTCTTGTGGCCTGGAGGCTGGGAGTGAAAAGAAGGAAAGAGGGAACCCTA
TTTCTGTTCAGTTGTTCCCCCCAGAGCTGGTGGAACACATTGTCTCCTTCCTCCCAGTCAAAGACTTGGT
CGCCCTAGGCCAGACCTGCCACTACTTCCATGAAGTGTGTGATGCTGAGGGCGTGTGGAGGCGCATCTGT
CGAAGGCTCAGCCCTCGAATCCGTGACCAGAGTTCTGGTGCCCGGCCCTGGAAGAGAGCTGCCATTCTTA
ACTATACAAAGGGCCTGTATTTCCAGGCATTCGGAGGACGCCGCCGATGTCTCAGCAAGAGTGTGGCCCC
CATGCTAGCCCATGGCTACCGCCGCTTCTTACCCACAAAGGACCACGTGTTCATTCTTGACTACGTGGGG
ACCCTCTTCTTCCTCAAAAATGCTCTGGTCTCCTCCACCCTCGGCCAGATCCAGTGGAAGCGGGCCTGCC
GCTACGTGGTGTTGTGTCGAGGCGCCAAGGATTTTGCGTCCGACCCAAGATGTGACACGGTTTACCGGAA
GTACCTCTATGTTTTGGCTACTCGGGAACAGCCGGCAGTGGTGGGCACCACCGGTAGCCGCGCCTGTGAC
TGTGTGGAGGTCTATCTGCAGTCCAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCT
TCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCTACTGCTCCTCACAGAGGAAGGAAAGAT
CTACTCCTTGGTTGTGAATGAGACCCAGCTGGACCAGCCACGCTCCTATACAGTGCAGTTAGCCCTCAGG
AAGGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTGCATGGCTTCCAACCAGAGCAGTACCCTCTATA
TCACGGGTGGGACTTTAATCCCTAGGAAACAGGTGCCTAAAGCTGCCGAGCTGAGGGCTCCTGACCCCCC
AGACCAGGGGGGAGTGTATTTTGAGGTGCATACCCCCGGGGTGTATCGTGATCTCTTTGGGACCCTTCAA
GCCTTTGACCCCCTGGACCACCAGATGCCACTGGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTGCTC
TTGGCTATAATCATCTTGGCCTGGTAGATGAATTTGGCCGGATCTTTATGCAGGGAAATAACAGATACGG
GCAGCTGGGAACTGGAGACAAAATGGACCGAGGGGAGCCCACACAGGTTCACTATCTGCAACGCCCCATC
GCCCTGTGGTGTGGCCTCAACCATTCCTTGGTGCTGAGTCAGACCTCGGATTTCAGCAAGGAGCTGCTGG
GGTGCGGCTGTGGGGCCGGAGGCCGTCTTCCTGGCTGGCCCAAGGGGAGCGCCTCCTTCGTCAAGCTGCA
CATCAAGGTCCCTTTGTGTGCCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCAC
GACATCGAACAGTGCCCTGTCTATCGAGACCTGCCAGCCAGCAGGGTGGGGGGGAGCCCTGAACCTAGCC
AGGGGGCTGGAGCCCCCCAAGACCCTGGGGGAACAGCCCAGGCCTGTGAGGAGTACCTCAGCCAGATCCA
CAGTTGCCCCACGTTGCAGGACCGAATGGAGAAGATGAAGGAGATTGTGGGCTGGATGCCCTTGATGGCT
GCCCAGAAAGATTTCTTCTGGGAGGCACTGGACATGTTGCAGAGGGCTGCTGGAGGGGCTGGCCCAGACA
CCTCGACTCCCGAGAGCTGA

Translation (589 aa):
MVKRSCPSCGLEAGSEKKERGNPISVQLFPPELVEHIVSFLPVKDLVALGQTCHYFHEVCDAEGVWRRIC
RRLSPRIRDQSSGARPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPMLAHGYRRFLPTKDHVFILDYVG
TLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPAVVGTTGSRACD
CVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALR
KVSRCLPHLRVTCMASNQSSTLYITGGTLIPRKQVPKAAELRAPDPPDQGGVYFEVHTPGVYRDLFGTLQ
AFDPLDHQMPLALSLPAKVLFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQRPI
ALWCGLNHSLVLSQTSDFSKELLGCGCGAGGRLPGWPKGSASFVKLHIKVPLCACSLCSTRECLYMLSSH
DIEQCPVYRDLPASRVGGSPEPSQGAGAPQDPGGTAQACEEYLSQIHSCPTLQDRMEKMKEIVGWMPLMA
AQKDFFWEALDMLQRAAGGAGPDTSTPES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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