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Report for CCDS24212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24212.1 Public Mus musculus 10 Tbk1 23 108 98 CCDS HistoryNCBI Gene:56480Re-query CCDS DB by CCDS ID:24212.1Re-query CCDS DB by GeneID:56480See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24212.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020316.3 ENSMUSP00000020316.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020316.3Link to Ensembl Protein Viewer:ENSMUSP00000020316.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000020316Re-query CCDS DB by Protein ID:ENSMUSP00000020316
Original member Current member NCBI NM_019786.4 NP_062760.3 Accepted alive Link to Nucleotide Sequence:NM_019786.4Link to Protein Sequence:NP_062760.3Re-query CCDS DB by Nucleotide ID:NM_019786Re-query CCDS DB by Protein ID:NP_062760Link to BLAST:NP_062760.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062760.3 729 Q9WUN2 729 100% 0 0

Chromosomal Locations for CCDS 24212.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121547137 121547188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121551251 121551322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121551487 121551593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121552200 121552296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121552408 121552509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121553029 121553068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121553745 121553821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121553903 121554024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121555987 121556065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121557202 121557303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121559847 121559938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121560241 121560299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121561577 121561773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121563926 121564105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121568029 121568139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121570631 121570791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121571843 121572024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121576274 121576403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121578580 121578720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121584196 121584282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2190 nt):
ATGCAGAGCACCTCCAACCATCTGTGGCTCCTGTCTGATATCCTAGGCCAGGGGGCCACTGCAAATGTCT
TCCGAGGAAGGCATAAGAAAACTGGTGATCTCTATGCTGTCAAAGTATTTAATAACATAAGCTTCCTTCG
CCCAGTGGATGTTCAAATGAGAGAATTTGAAGTGTTAAAAAAACTCAATCACAAAAACATTGTCAAGTTA
TTTGCTATTGAAGAGGAGACAACAACAAGACATAAAGTGCTTATTATGGAGTTTTGTCCCTGTGGGAGTT
TATACACTGTTCTAGAGGAGCCGTCCAATGCGTATGGACTTCCAGAATCAGAATTTCTCATTGTCTTACG
AGATGTGGTGGGCGGGATGAATCATCTCCGAGAGAACGGCATAGTGCACCGAGATATCAAGCCAGGCAAC
ATCATGCGCGTCATAGGGGAGGACGGCCAGTCTGTGTACAAACTCACGGATTTCGGCGCCGCTCGAGAGC
TGGAGGACGATGAGCAGTTTGTGTCTCTGTACGGCACAGAAGAGTACCTGCATCCGGACATGTATGAAAG
GGCAGTGCTAAGAAAGGACCATCAGAAGAAGTACGGGGCTACCGTTGATCTGTGGAGTGTTGGAGTGACA
TTCTACCATGCAGCCACGGGGTCGCTGCCGTTTAGACCCTTCGAGGGGCCTCGGAGGAACAAAGAAGTAA
TGTATAAAATAATCACTGGGAAGCCGTCTGGTGCAATATCTGGAGTACAGAAAGCAGAAAACGGACCAAT
TGACTGGAGTGGAGACATGCCTCTCTCCTGTAGTCTTTCTCAGGGTCTTCAGGCACTGCTTACCCCAGTT
CTTGCAAACATACTTGAAGCTGATCAGGAGAAGTGCTGGGGTTTTGACCAGTTCTTTGCAGAGACCAGTG
ATGTGCTTCACCGAATGGTGATCCATGTCTTCTCGCTACAACACATGACGGCGCATAAGATTTACATTCA
CAGCTATAACACTGCTGCTGTGTTCCATGAACTGGTCTATAAACAAACCAAGATTGTTTCCTCAAATCAA
GAACTTATCTACGAAGGACGACGCTTAGTCCTAGAACTCGGACGACTAGCCCAGCATTTTCCTAAAACCA
CAGAGGAAAATCCTATCTTTGTCACGAGCCGGGAACAACTCAATACCGTAGGACTGAGATATGAAAAAAT
TTCCCTCCCTAAAATACATCCACGCTATGATCTGGATGGGGACGCCAGCATGGCCAAGGCAGTGACGGGG
GTTGTGTGCTACGCCTGCAGAACTGCCAGTACCCTGCTGCTCTATCAAGAATTAATGCGAAAGGGGGTAC
GGTGGCTGGTTGAACTGGTTAAGGATGATTACAACGAGACCGTCCACAAGAAGACGGAGGTAGTGATCAC
ACTGGATTTCTGCATCAGGAACATTGAGAAGACTGTGAAAGTGTATGAGAAGTTGATGAAGGTCAACCTG
GAAGCCGCAGAGCTGGGTGAGATTTCAGACATACACACCAAGCTGCTGAGACTTTCCAGTTCTCAGGGAA
CAATAGAAAGCAGTCTTCAGGACATCAGCAGCAGGCTGTCTCCAGGGGGCTTGCTGGCCGACACCTGGGC
ACATCAAGAAGGCACGCATCCAAGAGACAGGAATGTAGAAAAACTGCAGGTCCTGTTGAACTGCATCACA
GAGATTTACTATCAGTTCAAAAAAGACAAAGCAGAACGCAGACTAGCTTATAATGAAGAACAGATCCACA
AATTTGATAAGCAAAAATTGTATTACCATGCCACAAAAGCAATGAGCCACTTCTCAGAAGAATGTGTTAG
AAAGTATGAAGCGTTTAAAGATAAGTCGGAAGAGTGGATGAGAAAGATGCTTCATCTTAGGAAGCAGCTG
TTATCGCTAACTAATCAGTGTTTCGATATCGAAGAGGAAGTGTCCAAGTATCAAGACTATACTAACGAGT
TACAAGAAACTCTGCCTCAGAAAATGCTCGCAGCCTCCGGCGGCGTCAAGCACGCCATGGCCCCGATCTA
CCCCAGCTCTAACACCTTAGTGGAGATGACTCTTGGTATGAAGAAGTTAAAGGAGGAGATGGAAGGCGTG
GTTAAGGAGCTGGCCGAGAACAATCATATTTTAGAAAGGTTTGGGTCTTTAACAATGGATGGTGGCCTTC
GCAATGTGGACTGTCTTTAG

Translation (729 aa):
MQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLYAVKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL
FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRDIKPGN
IMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSVGVT
FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPLSCSLSQGLQALLTPV
LANILEADQEKCWGFDQFFAETSDVLHRMVIHVFSLQHMTAHKIYIHSYNTAAVFHELVYKQTKIVSSNQ
ELIYEGRRLVLELGRLAQHFPKTTEENPIFVTSREQLNTVGLRYEKISLPKIHPRYDLDGDASMAKAVTG
VVCYACRTASTLLLYQELMRKGVRWLVELVKDDYNETVHKKTEVVITLDFCIRNIEKTVKVYEKLMKVNL
EAAELGEISDIHTKLLRLSSSQGTIESSLQDISSRLSPGGLLADTWAHQEGTHPRDRNVEKLQVLLNCIT
EIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATKAMSHFSEECVRKYEAFKDKSEEWMRKMLHLRKQL
LSLTNQCFDIEEEVSKYQDYTNELQETLPQKMLAASGGVKHAMAPIYPSSNTLVEMTLGMKKLKEEMEGV
VKELAENNHILERFGSLTMDGGLRNVDCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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