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Report for CCDS20815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20815.1 Public Mus musculus 7 Zfp128 23 108 98 CCDS HistoryNCBI Gene:243833Re-query CCDS DB by CCDS ID:20815.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000144578.1 ENSMUSP00000115378.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000144578.1Link to Ensembl Protein Viewer:ENSMUSP00000115378.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000144578Re-query CCDS DB by Protein ID:ENSMUSP00000115378
Original member Current member NCBI NM_153802.4 NP_722497.1 Accepted alive Link to Nucleotide Sequence:NM_153802.4Link to Protein Sequence:NP_722497.1Re-query CCDS DB by Nucleotide ID:NM_153802Re-query CCDS DB by Protein ID:NP_722497Link to BLAST:NP_722497.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722497.1 572 Q8BGV5 572 100% 0 0

Chromosomal Locations for CCDS 20815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 12881295 12881360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12884643 12884769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12885023 12885118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12889996 12891425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGGACCACCAGGACAAAGCAGCAACAGTGGCAATGGCCTCGCGGCCGCAAGCAACACAACTTCAGGAGC
CAGTGACTTTCCGAGATGTGGCTGTGGACTTTACCCAAGAGGAGTGGGGGCAGCTGGACCCTACCCAGAG
GACTCTGTATCGTGATGTGATGCTGGAGACCTTTGGGCACCTTCTCTCTGTGGGTCCTGATCTTCCCAAA
CCTGCAGTTATCTCCCAGCTGGAACAAGGTGCTGAGCTGTGGGTGGCAGACAGAGGAGGCACCGGGGCCT
GCCATCCAGGCTGGATTCTTGAACCTGAAGACCACACATTGCTCAAGGACCAGGGCCTCCCAAAAATGGA
ACCATCCCCTATTACAGAAAAGGATGGGTTTGCAAAGGCTGTTCCTTGTCGTTCTATGATAGGGATAGAT
CAGGAAAGTGATGGCCAGAGGCAGGCACTCAAGAAGGACCAGAGTAACTTGAATGACCCCAAAGAGATAC
CACTTCAAAGTCAAAGCCACAAAAGTCTTGGACTTGTGGAAGCCTGTGTTCTTGGCTTAAACACTTATCT
ATTACCAGATATTTCTGGAAGAGAGTATGGCTGTACTTATGACTCACAAGTTAAAAATTCAGAACATAAT
CCAAGCTTAGTTAGACAACGGACAGACTCCCCTGCAACACAGTCCTTTGATGACAATGGCAGTCAAAAAG
CCTTTGATCAAATTATGCCCATTACAGAACTCACAAAAAGTCAGGTGCAAGATAAACCCTATAAGTGTAC
TGATTGTGGGAAGTCATTTAACCATAACGCACATCTCACAGTGCACAAGAGAATTCATACGGGAGAAAGA
CCTTACATGTGCAAAGAGTGTGGGAAAGCCTTCAGCCAGAACTCCTCCCTTGTTCAACATGAGCGAATCC
ACACTGGAGACAAGCCTTATAAGTGTGATGAATGTGGGAAATCTTTTTGCCACAGTACACACCTTACAGT
CCATAGGAGAATTCACACTGGAGAGAAACCCTATGAGTGTCAGGACTGTGGGAGGGCCTTCAATCAGAAT
TCATCCCTAGGTCGACACAAGAGGACACACACTGGGGAGAAGCCTTATACCTGCAGTGTTTGTGGGAAAT
CTTTCTCCCGGACCACTTGCCTCTTCCTGCACCTGCGGACTCACACTGAGGAAAGGCCATACGAGTGTAA
TCACTGTGGAAAGGGCTTCAGGCACAGTTCCTCCCTGGCCCAGCATCAGCGGAAGCACGCTGGTGAGAAA
CCCTATGAGTGCCGACAGAGGCTGATCTTTGAGCAGGCGCCGGCTTTAATAAAGTACGAATGGACAGAAC
CCCTCGGCTGTGACTCACCGTTGAGTCAAGGTGAAAGGACTCAACGGAGTGATAGGCCCTTTAAGTGTAA
TCAGTGTGGAAAGTGTTTCACTCAGAGTTCTCACCTCATCCGACATCAGCTCACCCACAGCAGAGAGGAA
GAACCACTACGTGGACGTAGCAGAAGGCAAGAACAGCCGTGTAGACGGGGCTCAAGACTCATTCAGAATA
CAAACTCAAATTCAAGGGAGCTTCCTGTTGCCCAGCCAAAGGCAGGACAAGCCAGCAGAACCCTGGCCCT
GTTTGACCTTCGTGAAATTATGCAGGAGCAAAACCCTGTGCATGTTATTGGGGTAGAAGAACCTTCAGTG
GGCAACTCCATGCTGTTTGACACCAGAGAATCTAGATAG

Translation (572 aa):
MDHQDKAATVAMASRPQATQLQEPVTFRDVAVDFTQEEWGQLDPTQRTLYRDVMLETFGHLLSVGPDLPK
PAVISQLEQGAELWVADRGGTGACHPGWILEPEDHTLLKDQGLPKMEPSPITEKDGFAKAVPCRSMIGID
QESDGQRQALKKDQSNLNDPKEIPLQSQSHKSLGLVEACVLGLNTYLLPDISGREYGCTYDSQVKNSEHN
PSLVRQRTDSPATQSFDDNGSQKAFDQIMPITELTKSQVQDKPYKCTDCGKSFNHNAHLTVHKRIHTGER
PYMCKECGKAFSQNSSLVQHERIHTGDKPYKCDECGKSFCHSTHLTVHRRIHTGEKPYECQDCGRAFNQN
SSLGRHKRTHTGEKPYTCSVCGKSFSRTTCLFLHLRTHTEERPYECNHCGKGFRHSSSLAQHQRKHAGEK
PYECRQRLIFEQAPALIKYEWTEPLGCDSPLSQGERTQRSDRPFKCNQCGKCFTQSSHLIRHQLTHSREE
EPLRGRSRRQEQPCRRGSRLIQNTNSNSRELPVAQPKAGQASRTLALFDLREIMQEQNPVHVIGVEEPSV
GNSMLFDTRESR


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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