NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS28225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28225.1 Public Mus musculus 16 Adgrg7 23 108 98 CCDS HistoryNCBI Gene:239853Re-query CCDS DB by CCDS ID:28225.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28225.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023437.4 ENSMUSP00000023437.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023437.4Link to Ensembl Protein Viewer:ENSMUSP00000023437.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000023437Re-query CCDS DB by Protein ID:ENSMUSP00000023437
Original member Current member NCBI NM_172825.3 NP_766413.2 Accepted alive Link to Nucleotide Sequence:NM_172825.3Link to Protein Sequence:NP_766413.2Re-query CCDS DB by Nucleotide ID:NM_172825Re-query CCDS DB by Protein ID:NP_766413Link to BLAST:NP_766413.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766413.2 785 Q8BM96 785 100% 0 0

Chromosomal Locations for CCDS 28225.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 56724755 56724988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56730224 56730380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56732766 56732921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56740083 56740179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56742259 56742602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56747921 56748033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56750407 56750562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56752351 56752517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56761840 56761947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56762060 56762190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56767818 56767918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56770213 56770359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56773405 56773517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56777109 56777213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56778582 56778695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56795547 56795661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2358 nt):
ATGCGTTCCTGTCGTTCCTGCAATGTCCGGGTACTGGTGGCTATTGTGTGTGGGCTACTGACAGGCATTG
TTCTGGGACTCGGCATCTGGAGGATGGTCATAAGGATCAACAGAGGGATATTTGTTCCTGTGCCAAGTAT
CCCTGTACAGTTCTGCAGGAATGGCGGAACCTGGCAAAATGGCAGATGCATTTGTACAGAAGAGTGGAAA
GGGCTGCGTTGTACAATTGCTAATTTCTGTGAAAATAGTACCGACGGTGAATTCACCTTTGGCAGTATCC
CAGTGGGCAGATATGGACCCTCTTTGCAAACATGTGAACCGGGCACCCTCAATGCGGGCAGTCCTAAAGC
AACTCGGCTGTGCAATGTTTCTGAGTTTGGAAACATAGAACTACAAAATGTAACCAAAGGAAGTTGTAAT
ATAAATCTACAGACCCTGGAGATACAGATAAACAACCAAACAGCAAGTGCTGAGAATATTTCTAGAGAAG
CCCAGGTTTTAACAGCAGATGCCAGTAAACTGACTGCTCAGAATATCACTTCTGCTACTACAGTGGTTGG
ACAGATCTTCGGTAAAGCCAACAATGAAAGCCAGGCAAAAAAAACTGCTATAGCCACAGTGAGTCAGATT
TTGGATGCCAGTGAAGATGTTTTTCAAAAAGCTGCTGAGATGGACAACAGCAAATCCTTTAGCAATCTTA
TCAAGCAAATGGAGAATTACTCCTATTCTCAAGGTGATCAGACAGTGGTGGAACCCAATATAGCAATCCA
GTCCGTCACTCGAGACGACAATTCAGGGCCAAGTGTTCTCTTCTCCGTACAGAAAGGATCTAGTAATTCT
CTGGTTTCTGGTAGAATATTGATTAACAAAACTGCAAATGGACTCAACCCAGACGGACAGACCGAACTTC
AGATCTTACTTAATACTGGGGAAAATAGAAAATCATGTGGTTTTATGGTGTATCAAAACCACAAACTTTT
CCAATCAAAAACTTTCACTGCTACATCAGATTTTAGTCAAAAAATTATCTCCAGCAAAATAAATGAAAGT
GAACAACAACGCCAAAATAAAGTTTCTGTGGAAATGGTATTTAATCCTACGTATGACAAAAGAGAACTCC
GGCTTCACTCCTATGCTTGTGTCTACTGGAATTTTTTAATAAATGACTGGGACACACAAGGCTGCCAAAA
AACCGGGAACACCACAGAATTCCTCCGTTGCAACTGCAGCCACACGACCAATTTCGCTGTATTGATGAGT
TTCAAAAAGGATTACAAGTATCCCAAATCTCTAGACATATTATCCAACATCGGCTGTGCCTTATCCATTG
CTGGTCTGGCTCTCACAATCTTATTCCAGATTCTCACCAGGAAAATCAGAAAAACCTCAGTAACCTGGGT
GTTGGTCAGTTTGTGTTCATCAATGTTGATTTTTAACCTCCTCTTTGTGTTTGGAATTGAAAACTCCAAT
AAGAACCTAAAGACAAGTGATAGTGACATCAATGTTAAACCTGAAAATAACAAAATACCAGAAAGTGACA
CCATTGAAACCCCGAATCCCTCATGCACAGCCATTGCTGCCTTGCTCCACTACTTTCTGCTGGTGACATT
CACCTGGAATGGACTCAGTGCTACACAACTCTACTTCCTTCTGATAAGAACCATGAAGCCTCTCCCTCGG
CATTTCATTATCTTCATCTCATTAGTTGGATGGGGAGTTCCAGCAATAATAGTAGGTGTGACGATTGGGA
GTATTTATGCCCTGAGTGGGAACAAGAGGTACTGGGAGTTAGACTATCGGCAAGAGGAAATTTGCTGGCT
GGCCGTTCCCAAGGACAATGATTATGCAAGAAGTCCACTTTTGTGGTCGTTCATCATACCTGTAACCATT
ATCCTCATCACCAACATTACTATATTTGTCATAATCACAGTCAAAGTGTTGTGGAAGAACAACCAGAACC
TGACAAGCACAAAAAAAGTTTCATCCCTAAAGAAGGTTTTCAGCACACTATCTATCGCTGTTGTTTTTGG
AGTTACCTGGATCTTGGCATATGCTATGCTAATTAGTAACGATGACATCAGGATTGTTTTCAGCTACATA
TTCTGTCTTTTCAACACCACTCAGGGATTGCAAATATTCATTCTCTACACTGTTCGAACAAAAGTATTTC
AGAGTGAAGCTTCCAAAATACTGAAGTCACTGTCATCATCCTTTGATAGAACGAAGCCAATGCCTTCGAT
AACCCCGCTGAAACTGCGTGTAAGGATGTACAATATGCTCAGGTCCCTACCATCCCTAAATGAACGCTTT
AGGCTGCTGGAGCCATCTGGAATGACTGAGGAAACATCATTGTCTTGA

Translation (785 aa):
MRSCRSCNVRVLVAIVCGLLTGIVLGLGIWRMVIRINRGIFVPVPSIPVQFCRNGGTWQNGRCICTEEWK
GLRCTIANFCENSTDGEFTFGSIPVGRYGPSLQTCEPGTLNAGSPKATRLCNVSEFGNIELQNVTKGSCN
INLQTLEIQINNQTASAENISREAQVLTADASKLTAQNITSATTVVGQIFGKANNESQAKKTAIATVSQI
LDASEDVFQKAAEMDNSKSFSNLIKQMENYSYSQGDQTVVEPNIAIQSVTRDDNSGPSVLFSVQKGSSNS
LVSGRILINKTANGLNPDGQTELQILLNTGENRKSCGFMVYQNHKLFQSKTFTATSDFSQKIISSKINES
EQQRQNKVSVEMVFNPTYDKRELRLHSYACVYWNFLINDWDTQGCQKTGNTTEFLRCNCSHTTNFAVLMS
FKKDYKYPKSLDILSNIGCALSIAGLALTILFQILTRKIRKTSVTWVLVSLCSSMLIFNLLFVFGIENSN
KNLKTSDSDINVKPENNKIPESDTIETPNPSCTAIAALLHYFLLVTFTWNGLSATQLYFLLIRTMKPLPR
HFIIFISLVGWGVPAIIVGVTIGSIYALSGNKRYWELDYRQEEICWLAVPKDNDYARSPLLWSFIIPVTI
ILITNITIFVIITVKVLWKNNQNLTSTKKVSSLKKVFSTLSIAVVFGVTWILAYAMLISNDDIRIVFSYI
FCLFNTTQGLQIFILYTVRTKVFQSEASKILKSLSSSFDRTKPMPSITPLKLRVRMYNMLRSLPSLNERF
RLLEPSGMTEETSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH