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Report for CCDS21777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21777.1 Public Mus musculus 7 Gprc5b 23 108 98 CCDS HistoryNCBI Gene:64297Re-query CCDS DB by CCDS ID:21777.1Re-query CCDS DB by GeneID:64297See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008878.9 ENSMUSP00000008878.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008878.9Link to Ensembl Protein Viewer:ENSMUSP00000008878.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000008878Re-query CCDS DB by Protein ID:ENSMUSP00000008878
Original member Current member NCBI NM_022420.2 NP_071865.1 Accepted alive Link to Nucleotide Sequence:NM_022420.2Link to Protein Sequence:NP_071865.1Re-query CCDS DB by Nucleotide ID:NM_022420Re-query CCDS DB by Protein ID:NP_071865Link to BLAST:NP_071865.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071865.1 410 Q923Z0 410 100% 0 0

Chromosomal Locations for CCDS 21777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 118975159 118975203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118976513 118976670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118983615 118984644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGTTCCTGGTGTTAGAGAGAAAGATGAGAACCCATCAAGTGTTTCCCTTGCCCCTGCTCCTGGTGATTG
CCTCCGTGGCTTCAGAGAACGCCAGCACGTCCCGGGGCTGTGGACTGGACCTTCTTCCTCAGTACGTGTC
CCTGTGCGACCTGGACGCCATCTGGGGCATCGTGGTGGAGGCAGTGGCCGGGGCGGGGGCCCTGATCACA
CTGCTTCTGATGCTCATTCTCCTAGTGAGACTACCCTTCATCAAGGACAAGGAAAGGAAGCGGCCTGTGT
GCCTCCATTTCCTCTTCCTGCTGGGGACCCTGGGCCTCTTTGGCCTGACGTTTGCCTTCATCATCCAGAT
GGACGAGACAATCTGCTCCATCCGACGCTTCCTCTGGGGTGTCCTCTTCGCGCTCTGCTTTTCCTGCCTG
CTGAGCCAGGCGTGGCGGGTGCGGAGGCTGGTGCGCCAGGGCACAAGCCCGGCCAGCTGGCAGCTGGTGA
GCCTGGCACTGTGCCTGATGCTGGTGCAGGTCATCATTGCCACTGAGTGGCTGGTGCTGACTGTGCTGCG
TGACACGAAGCCAGCCTGCGCCTACGAGCCCATGGATTTTGTGATGGCGCTCATCTACGACATGGTGCTG
CTGGCCATCACCCTGGCCCAGTCCCTCTTCACGCTGTGTGGCAAGTTCAAACGGTGGAAGGTGAACGGAG
CCTTCATCCTCGTCACTACCTTCCTCTCTGCGCTCATCTGGGTGGTCTGGATGACCATGTACCTCTTCGG
CAACTCATTAATTAAGCAGGGAGATGCCTGGAGCGACCCCACCTTGGCCATTACACTGGCAGCCAGCGGA
TGGGTCTTTGTCATCTTCCATGCCATTCCGGAGATCCACTACACCCTTCTCCCACCCCTGCAGGAGAACC
CACCCAACTACTTCGACACTTCACAGCCCAGGATGCGGGAGACAGCATTTGATGAGGAAATGCACCTGCC
TCGGGCCTACATGGAGAACAAGGCCTTCTCAATGGATGAACATAACGCAGCTCTCCGATCAGCAGTGGGC
TTTTCCAATGGAAGCTTGGAGCAAAGATCTAGCAGCCTGGGAAAGAAGCCCAGCAGCTTGGGAAACCGGC
CCAGTGCACCGTTCAGAAGCAATGTGTATCAGCCGACCGAGATGGCCGTCGTGCTCAATGGAGGGACTAT
CCCAACTGCTCCGCCATCTCACACGGGAAGACACCATTGGTGA

Translation (410 aa):
MFLVLERKMRTHQVFPLPLLLVIASVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGAGALIT
LLLMLILLVRLPFIKDKERKRPVCLHFLFLLGTLGLFGLTFAFIIQMDETICSIRRFLWGVLFALCFSCL
LSQAWRVRRLVRQGTSPASWQLVSLALCLMLVQVIIATEWLVLTVLRDTKPACAYEPMDFVMALIYDMVL
LAITLAQSLFTLCGKFKRWKVNGAFILVTTFLSALIWVVWMTMYLFGNSLIKQGDAWSDPTLAITLAASG
WVFVIFHAIPEIHYTLLPPLQENPPNYFDTSQPRMRETAFDEEMHLPRAYMENKAFSMDEHNAALRSAVG
FSNGSLEQRSSSLGKKPSSLGNRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHHW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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