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Report for CCDS16560.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16560.1 Public Mus musculus 2 Grem1 23 108 98 CCDS HistoryNCBI Gene:23892Re-query CCDS DB by CCDS ID:16560.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16560.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099575.3 ENSMUSP00000097170.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099575.3Link to Ensembl Protein Viewer:ENSMUSP00000097170.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099575Re-query CCDS DB by Protein ID:ENSMUSP00000097170
Original member Current member NCBI NM_011824.4 NP_035954.1 Accepted alive Link to Nucleotide Sequence:NM_011824.4Link to Protein Sequence:NP_035954.1Re-query CCDS DB by Nucleotide ID:NM_011824Re-query CCDS DB by Protein ID:NP_035954Link to BLAST:NP_035954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035954.1 184 O70326 184 100% 0 0

Chromosomal Locations for CCDS 16560.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 113749600 113750154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGAATCGCACCGCATACACTGTGGGAGCGTTGCTTCTCCTCCTGGGGACCCTACTGCCAACAGCTGAGG
GGAAAAAGAAAGGTTCCCAAGGAGCCATTCCGCCTCCTGACAAGGCTCAGCACAATGACTCTGAGCAGAC
CCAGTCCCCACCACAACCTGGCTCCAGGACCCGGGGGCGGGGCCAGGGGCGGGGCACCGCCATGCCTGGA
GAGGAGGTGCTTGAGTCCAGCCAAGAGGCCCTGCACGTGACAGAGCGCAAGTATCTGAAGCGAGATTGGT
GCAAAACTCAGCCCCTGAAGCAGACCATCCACGAGGAGGGCTGCAACAGCCGCACTATCATCAACCGCTT
CTGTTATGGCCAGTGCAACTCCTTCTACATCCCCAGGCACATCCGAAAGGAGGAAGGGTCCTTTCAGTCT
TGCTCCTTCTGCAAGCCCAAGAAGTTCACCACCATGATGGTCACACTCAACTGTCCTGAGCTACAGCCAC
CCACCAAGAAGAAAAGGGTCACACGCGTGAAGCAGTGCCGTTGCATATCCATCGACTTGGATTAA

Translation (184 aa):
MNRTAYTVGALLLLLGTLLPTAEGKKKGSQGAIPPPDKAQHNDSEQTQSPPQPGSRTRGRGQGRGTAMPG
EEVLESSQEALHVTERKYLKRDWCKTQPLKQTIHEEGCNSRTIINRFCYGQCNSFYIPRHIRKEEGSFQS
CSFCKPKKFTTMMVTLNCPELQPPTKKKRVTRVKQCRCISIDLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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