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Report for CCDS22376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22376.1 Public Mus musculus 8 Gdf15 23 108 98 CCDS HistoryNCBI Gene:23886Re-query CCDS DB by CCDS ID:22376.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22376.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003808.7 ENSMUSP00000003808.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003808.7Link to Ensembl Protein Viewer:ENSMUSP00000003808.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000003808Re-query CCDS DB by Protein ID:ENSMUSP00000003808
Original member Current member EBI ENSMUST00000110103.1 ENSMUSP00000105730.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110103.1Link to Ensembl Protein Viewer:ENSMUSP00000105730.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000110103Re-query CCDS DB by Protein ID:ENSMUSP00000105730
Original member Current member NCBI NM_001330687.1 NP_001317616.1 Accepted alive Link to Nucleotide Sequence:NM_001330687.1Link to Protein Sequence:NP_001317616.1Re-query CCDS DB by Nucleotide ID:NM_001330687Re-query CCDS DB by Protein ID:NP_001317616Link to BLAST:NP_001317616.1
Original member NCBI NM_011819.3 NP_035949.2 Updated not alive Link to Nucleotide Sequence:NM_011819.3Link to Protein Sequence:NP_035949.2Re-query CCDS DB by Nucleotide ID:NM_011819Re-query CCDS DB by Protein ID:NP_035949
Current member NCBI NM_011819.4 NP_035949.2 Accepted alive Link to Nucleotide Sequence:NM_011819.4Link to Protein Sequence:NP_035949.2Re-query CCDS DB by Nucleotide ID:NM_011819Re-query CCDS DB by Protein ID:NP_035949Link to BLAST:NP_035949.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317616.1 303 Q9Z0J7 303 100% 0 0
NP_035949.2 303 Q9Z0J7 303 100% 0 0

Chromosomal Locations for CCDS 22376.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70629543 70630174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70631333 70631612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGCCCCGCCCGCGCTCCAGGCCCAGCCTCCAGGCGGCTCTCAACTGAGGTTCCTGCTGTTCCTGCTGC
TGTTGCTGCTGCTGCTGTCATGGCCATCGCAGGGGGACGCCCTGGCAATGCCTGAACAGCGACCCTCCGG
CCCTGAGTCCCAACTCAACGCCGACGAGCTACGGGGTCGCTTCCAGGACCTGCTGAGCCGGCTGCATGCC
AACCAGAGCCGAGAGGACTCGAACTCAGAACCAAGTCCTGACCCAGCTGTCCGGATACTCAGTCCAGAGG
TGAGATTGGGGTCCCACGGCCAGCTGCTACTCCGCGTCAACCGGGCGTCGCTGAGTCAGGGTCTCCCCGA
AGCCTACCGCGTGCACCGAGCGCTGCTCCTGCTGACGCCGACGGCCCGCCCCTGGGACATCACTAGGCCC
CTGAAGCGTGCGCTCAGCCTCCGGGGACCCCGTGCTCCCGCATTACGCCTGCGCCTGACGCCGCCTCCGG
ACCTGGCTATGCTGCCCTCTGGCGGCACGCAGCTGGAACTGCGCTTACGGGTAGCCGCCGGCAGGGGGCG
CCGAAGCGCGCATGCGCACCCAAGAGACTCGTGCCCACTGGGTCCGGGGCGCTGCTGTCACTTGGAGACT
GTGCAGGCAACTCTTGAAGACTTGGGCTGGAGCGACTGGGTGCTGTCCCCGCGCCAGCTGCAGCTGAGCA
TGTGCGTGGGCGAGTGTCCCCACCTGTATCGCTCCGCGAACACGCATGCGCAGATCAAAGCACGCCTGCA
TGGCCTGCAGCCTGACAAGGTGCCTGCCCCGTGCTGTGTCCCCTCCAGCTACACCCCGGTGGTTCTTATG
CACAGGACAGACAGTGGTGTGTCACTGCAGACTTATGATGACCTGGTGGCCCGGGGCTGCCACTGCGCTT
GA

Translation (303 aa):
MAPPALQAQPPGGSQLRFLLFLLLLLLLLSWPSQGDALAMPEQRPSGPESQLNADELRGRFQDLLSRLHA
NQSREDSNSEPSPDPAVRILSPEVRLGSHGQLLLRVNRASLSQGLPEAYRVHRALLLLTPTARPWDITRP
LKRALSLRGPRAPALRLRLTPPPDLAMLPSGGTQLELRLRVAAGRGRRSAHAHPRDSCPLGPGRCCHLET
VQATLEDLGWSDWVLSPRQLQLSMCVGECPHLYRSANTHAQIKARLHGLQPDKVPAPCCVPSSYTPVVLM
HRTDSGVSLQTYDDLVARGCHCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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