NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33027.1 Public Homo sapiens 19 PLD3 24 110 108 CCDS HistoryNCBI Gene:23646Re-query CCDS DB by CCDS ID:33027.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33027.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356508.9 ENSP00000348901.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356508.9Link to Ensembl Protein Viewer:ENSP00000348901.5Re-query CCDS DB by Nucleotide ID:ENST00000356508Re-query CCDS DB by Protein ID:ENSP00000348901
Original member Current member EBI ENST00000409419.5 ENSP00000386293.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409419.5Link to Ensembl Protein Viewer:ENSP00000386293.1Re-query CCDS DB by Nucleotide ID:ENST00000409419Re-query CCDS DB by Protein ID:ENSP00000386293
Original member Current member EBI ENST00000409735.9 ENSP00000386938.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409735.9Link to Ensembl Protein Viewer:ENSP00000386938.3Re-query CCDS DB by Nucleotide ID:ENST00000409735Re-query CCDS DB by Protein ID:ENSP00000386938
Original member Current member EBI ENST00000409281.5 ENSP00000387022.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409281.5Link to Ensembl Protein Viewer:ENSP00000387022.1Re-query CCDS DB by Nucleotide ID:ENST00000409281Re-query CCDS DB by Protein ID:ENSP00000387022
Original member Current member EBI ENST00000409587.5 ENSP00000387050.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409587.5Link to Ensembl Protein Viewer:ENSP00000387050.1Re-query CCDS DB by Nucleotide ID:ENST00000409587Re-query CCDS DB by Protein ID:ENSP00000387050
Original member Current member EBI ENST00000700616.1 ENSP00000515107.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700616.1Link to Ensembl Protein Viewer:ENSP00000515107.1Re-query CCDS DB by Nucleotide ID:ENST00000700616Re-query CCDS DB by Protein ID:ENSP00000515107
Original member Current member EBI ENST00000700619.1 ENSP00000515110.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700619.1Link to Ensembl Protein Viewer:ENSP00000515110.1Re-query CCDS DB by Nucleotide ID:ENST00000700619Re-query CCDS DB by Protein ID:ENSP00000515110
Original member Current member EBI ENST00000700620.1 ENSP00000515111.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700620.1Link to Ensembl Protein Viewer:ENSP00000515111.1Re-query CCDS DB by Nucleotide ID:ENST00000700620Re-query CCDS DB by Protein ID:ENSP00000515111
Original member Current member EBI ENST00000700621.1 ENSP00000515112.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700621.1Link to Ensembl Protein Viewer:ENSP00000515112.1Re-query CCDS DB by Nucleotide ID:ENST00000700621Re-query CCDS DB by Protein ID:ENSP00000515112
Original member Current member EBI ENST00000700623.1 ENSP00000515113.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700623.1Link to Ensembl Protein Viewer:ENSP00000515113.1Re-query CCDS DB by Nucleotide ID:ENST00000700623Re-query CCDS DB by Protein ID:ENSP00000515113
Original member Current member EBI ENST00000700625.1 ENSP00000515115.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700625.1Link to Ensembl Protein Viewer:ENSP00000515115.1Re-query CCDS DB by Nucleotide ID:ENST00000700625Re-query CCDS DB by Protein ID:ENSP00000515115
Original member Current member EBI ENST00000700626.1 ENSP00000515116.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700626.1Link to Ensembl Protein Viewer:ENSP00000515116.1Re-query CCDS DB by Nucleotide ID:ENST00000700626Re-query CCDS DB by Protein ID:ENSP00000515116
Original member Current member EBI ENST00000700628.1 ENSP00000515117.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700628.1Link to Ensembl Protein Viewer:ENSP00000515117.1Re-query CCDS DB by Nucleotide ID:ENST00000700628Re-query CCDS DB by Protein ID:ENSP00000515117
Original member Current member EBI ENST00000700630.1 ENSP00000515118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700630.1Link to Ensembl Protein Viewer:ENSP00000515118.1Re-query CCDS DB by Nucleotide ID:ENST00000700630Re-query CCDS DB by Protein ID:ENSP00000515118
Original member Current member EBI ENST00000700631.1 ENSP00000515119.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700631.1Link to Ensembl Protein Viewer:ENSP00000515119.1Re-query CCDS DB by Nucleotide ID:ENST00000700631Re-query CCDS DB by Protein ID:ENSP00000515119
Original member Current member EBI ENST00000700632.1 ENSP00000515120.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700632.1Link to Ensembl Protein Viewer:ENSP00000515120.1Re-query CCDS DB by Nucleotide ID:ENST00000700632Re-query CCDS DB by Protein ID:ENSP00000515120
Original member Current member EBI ENST00000700633.1 ENSP00000515121.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700633.1Link to Ensembl Protein Viewer:ENSP00000515121.1Re-query CCDS DB by Nucleotide ID:ENST00000700633Re-query CCDS DB by Protein ID:ENSP00000515121
Original member Current member EBI ENST00000700634.1 ENSP00000515122.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700634.1Link to Ensembl Protein Viewer:ENSP00000515122.1Re-query CCDS DB by Nucleotide ID:ENST00000700634Re-query CCDS DB by Protein ID:ENSP00000515122
Original member Current member EBI ENST00000700637.1 ENSP00000515123.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700637.1Link to Ensembl Protein Viewer:ENSP00000515123.1Re-query CCDS DB by Nucleotide ID:ENST00000700637Re-query CCDS DB by Protein ID:ENSP00000515123
Original member Current member NCBI NM_001031696.4 NP_001026866.1 Accepted alive Link to Nucleotide Sequence:NM_001031696.4Link to Protein Sequence:NP_001026866.1Re-query CCDS DB by Nucleotide ID:NM_001031696Re-query CCDS DB by Protein ID:NP_001026866Link to BLAST:NP_001026866.1
Original member Current member NCBI NM_001291311.2 NP_001278240.1 Accepted alive Link to Nucleotide Sequence:NM_001291311.2Link to Protein Sequence:NP_001278240.1Re-query CCDS DB by Nucleotide ID:NM_001291311Re-query CCDS DB by Protein ID:NP_001278240Link to BLAST:NP_001278240.1
Original member Current member NCBI NM_012268.4 NP_036400.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012268.4Link to Protein Sequence:NP_036400.2Re-query CCDS DB by Nucleotide ID:NM_012268Re-query CCDS DB by Protein ID:NP_036400Link to BLAST:NP_036400.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026866.1 490 Q8IV08 490 100% 0 0
NP_001278240.1 490 Q8IV08 490 100% 0 0
NP_036400.2 490 Q8IV08 490 100% 0 0

Chromosomal Locations for CCDS 33027.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40366484 40366510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40366610 40366684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40366773 40366915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40367696 40367879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40369908 40370028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40370110 40370237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40371673 40371873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40374481 40374620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40376609 40376774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40377786 40377885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40377986 40378173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGAAGCCTAAACTGATGTACCAGGAGCTGAAGGTGCCTGCAGAGGAGCCCGCCAATGAGCTGCCCATGA
ATGAGATTGAGGCGTGGAAGGCTGCGGAAAAGAAAGCCCGCTGGGTCCTGCTGGTCCTCATTCTGGCGGT
TGTGGGCTTCGGAGCCCTGATGACTCAGCTGTTTCTATGGGAATACGGCGACTTGCATCTCTTTGGGCCC
AACCAGCGCCCAGCCCCCTGCTATGACCCTTGCGAAGCAGTGCTGGTGGAAAGCATTCCTGAGGGCCTGG
ACTTCCCCAATGCCTCCACGGGGAACCCTTCCACCAGCCAGGCCTGGCTGGGCCTGCTCGCCGGTGCGCA
CAGCAGCCTGGACATCGCCTCCTTCTACTGGACCCTCACCAACAATGACACCCACACGCAGGAGCCCTCT
GCCCAGCAGGGTGAGGAGGTCCTCCGGCAGCTGCAGACCCTGGCACCAAAGGGCGTGAACGTCCGCATCG
CTGTGAGCAAGCCCAGCGGGCCCCAGCCACAGGCGGACCTGCAGGCTCTGCTGCAGAGCGGTGCCCAGGT
CCGCATGGTGGACATGCAGAAGCTGACCCATGGCGTCCTGCATACCAAGTTCTGGGTGGTGGACCAGACC
CACTTCTACCTGGGCAGTGCCAACATGGACTGGCGTTCACTGACCCAGGTCAAGGAGCTGGGCGTGGTCA
TGTACAACTGCAGCTGCCTGGCTCGAGACCTGACCAAGATCTTTGAGGCCTACTGGTTCCTGGGCCAGGC
AGGCAGCTCCATCCCATCAACTTGGCCCCGGTTCTATGACACCCGCTACAACCAAGAGACACCAATGGAG
ATCTGCCTCAATGGAACCCCTGCTCTGGCCTACCTGGCGAGTGCGCCCCCACCCCTGTGTCCAAGTGGCC
GCACTCCAGACCTGAAGGCTCTACTCAACGTGGTGGACAATGCCCGGAGTTTCATCTACGTCGCTGTCAT
GAACTACCTGCCCACTCTGGAGTTCTCCCACCCTCACAGGTTCTGGCCTGCCATTGACGATGGGCTGCGG
CGGGCCACCTACGAGCGTGGCGTCAAGGTGCGCCTGCTCATCAGCTGCTGGGGACACTCGGAGCCATCCA
TGCGGGCCTTCCTGCTCTCTCTGGCTGCCCTGCGTGACAACCATACCCACTCTGACATCCAGGTGAAACT
CTTTGTGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGCCCGTGTCAACCACAACAAGTACATG
GTGACTGAACGCGCCACCTACATCGGAACCTCCAACTGGTCTGGCAACTACTTCACGGAGACGGCGGGCA
CCTCGCTGCTGGTGACGCAGAATGGGAGGGGCGGCCTGCGGAGCCAGCTGGAGGCCATTTTCCTGAGGGA
CTGGGACTCCCCTTACAGCCATGACCTTGACACCTCAGCTGACAGCGTGGGCAACGCCTGCCGCCTGCTC
TGA

Translation (490 aa):
MKPKLMYQELKVPAEEPANELPMNEIEAWKAAEKKARWVLLVLILAVVGFGALMTQLFLWEYGDLHLFGP
NQRPAPCYDPCEAVLVESIPEGLDFPNASTGNPSTSQAWLGLLAGAHSSLDIASFYWTLTNNDTHTQEPS
AQQGEEVLRQLQTLAPKGVNVRIAVSKPSGPQPQADLQALLQSGAQVRMVDMQKLTHGVLHTKFWVVDQT
HFYLGSANMDWRSLTQVKELGVVMYNCSCLARDLTKIFEAYWFLGQAGSSIPSTWPRFYDTRYNQETPME
ICLNGTPALAYLASAPPPLCPSGRTPDLKALLNVVDNARSFIYVAVMNYLPTLEFSHPHRFWPAIDDGLR
RATYERGVKVRLLISCWGHSEPSMRAFLLSLAALRDNHTHSDIQVKLFVVPADEAQARIPYARVNHNKYM
VTERATYIGTSNWSGNYFTETAGTSLLVTQNGRGGLRSQLEAIFLRDWDSPYSHDLDTSADSVGNACRLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH