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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS23546.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
23546.1 |
Public |
Mus musculus |
9 |
Plxnb1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 23546.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000072093.12 |
ENSMUSP00000071966.6 |
Accepted |
alive |
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NCBI |
NM_172775.2 |
NP_766363.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_766363.2 |
2119 |
Q8CJH3 |
2119 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 23546.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6360 nt): ATGTCTGTCCTCGGCCCAGTTCTTCTCCAGGTGTTCTGGGCCGGGTGTGTCGTCACCCTGCGGTCCCCTC TGCCAGCTGCTTTCACTGCCAATGGCACACATCTACAACACTTGGCAAGGGACCCCACCACAGGTACCCT CTATGTAGGGGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGGTGTCCACG GGCCCTGTGAATGACAGCCGGGATTGCCTGCCACCTGTGATACCTGATGAATGTCCCCAAGCCCAGCCTA CTAACAACCCTAACCAGCTGCTCCTGGTGAGCCCAGAGGCTCTGGTGGTGTGTGGGAGCGTACACCAGGG CATCTGTGAGCTACGGAGCCTGGGACAGATCAGGCAGCTGCTGCTACGGCCAGAGCGACCTGGGGACACC CAGTATGTGGCTGCAAATGACCCTGCAGTCAGTACAGTGGGGCTGGTGGCCCAGGGATTGGTAGGGGAGC CCCTCCTGTTTGTGGGGCGGGGGTACACCAGCAGGGGTGTAGGTGGTGGGATTCCTCCCATTACAACCCG AGCCCTGCGACCACCGGACCCCCAAGCTGCCTTCTCTTATGAAGAAACAGCCAAGTTAGCAGTGGGCCGC CTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCTGTTCTTGC GGCGAGACCTGAAGGCCCCTTCTAGAGCTTTCCGTGCCTATGTGTCTCGAGTGTGCCTTCAGGACCAGCA CTACTACTCTTATGTGGAATTGCCCCTGGCCTGCCAGGGTGGTCGTTACGGTCTTATCCAGGCTGCAGCT GTAGCCACGTCCAAGGAGGTGGCCCGTGGGGACGTACTCTTTGCAGCTTTCTCCTCAGTGGCTCCTCCCA CTGTGGATTGGCCCCTGTCAGCATCTACTGGGGCATCTGGAACCTCTGTGCTCTGTGCCTTCCCCCTGGA TGAGGTAGACCAGCTTGCTAATTACACTCGAGATGCCTGTTATACTCGGGAAGGCCGTGCTGAGAACGGG ACCAAGGTTGCTGACATTGCATACGATGTCCTTTCCGACTGTGCGCAGCTACCAGTGGACACCCCGGATG CTTTTCCATGTGGCTCTGACCACACACCCAGTCCCATGGTCAGCTGTGTCCCTTTGGAAGCCACGCCAAT TCTGGAGCTACCAGGGGTTCAGCTAACAGCTGTGGCTGTCACCATGGAGGATGGACACACTATTGCTTTC CTGGGTGACAGTCAAGGACAGTTGCATAGGGTCTACTTAGGCCCTGGAAGAAGTGCTGCCCCATATTCTA AACAGAGCATCCAGCCGGGGTCTCCTGTGAACAGAGATCTTACCTTTGATGGTACCTTTGAGCATCTCTA TGTAGCAACTCAGACTACTCTTGTGAAGGTTCCTGTGGCTCCTTGTGCTCAGCATCTGGACTGTGACTCT TGCCTTGCTCACAGGGACCCTTATTGCGGATGGTGTGTGCTCCTGGGCAGGTGTAGTCGCCGGTCGGAGT GCTCAAGGGACCAGGGCCCAGAGCAGTGGCTGTGGAGCTTCCAGCCGGAACTGGGCTGTCTTCGAGTGGT GGCCGTGAGCCCTGCCAATATCAGTCGGGAAGAGAGGAGGGAGGTTTTCTTGTCAGTGCCAGGCCTGCCA TCTCTCTGGCCAGGGGAGTCATATTTCTGCTACTTTGGAGACCAACAGAGTCCTGCTCTACTGACCAGTT CTGGTGTGATGTGTCCCTCCCCAGACCCCAGTGAGGCTCCAGTGCTGCAGAGAGGAGCCGACCATATCTC TGTGAACGTGGAGCTCAGGTTTGGTGCCGTGGTGATCGCCAGCACCTCCCTCTCCTTCTATGACTGCGTG GCAGTTACTGCGTCTTCCCCATCTGCACCGTGCCGGGCCTGTGTGAGCAGCCGCTGGGGCTGTAACTGGT GTGTGTGGCAGCAGCTGTGCACACACAAGGCCTCGTGTGACGCTGGGCCTATGGTGGCAAGCCAACAGAG CCCACTCCTTCCCCTAATCCCTCCTGCAAGGGATGAACTCACCCCTTTCCCACCCACAGTCCCCCAAACC ACGGTCACTCCTACCCCCAACAGCTTCCCAATAGAGCCTAGGGCTCCCTCCACAGCCTCAGATGTCCTAC CTGGGGCCAAGCCTTCCCGGCTCAGCCTCTGGGGCCCATGGGCAGGTCCTGGCCCCATACTTTCCCCTAC TTCCACAGAGTCACCTCTTCATGAGAAGCCCCTTCCTCCTGACCCCCCTACCATACCTGGAACCACTGTC CCTGCCCCCACTGGCTTGGGACCATCGACCACACCTGAGGACCTCTTGGCCTCCTACCCATTCCCCTCAG ATGCAGCTGCAGTGTCCCCTGCAGAGCCTGGCCCTGAGGCTCTGCCTTCCATGGTGGCTCTGGACCAGCC CCCTGGCACTGTTCCAGACACTACTTTCCCAGGGGCCCCTGGCTCCATGAAGCCCGTTCTGGATTGGCTC ACCAAAGGAGGCGGCGAGCTGCCCGAGGCGGATGAGTGGATGGGGGGTGACACGCCCGCCTTCTCCACTT CCACACTCCTCTCAGGTGATGGAGACTCAGCAGAGCACGAGGGCCCTCCTGCCCCCCTCATCCTCCTGTC CAGCCTCGACTACCAGTACGACACCCCCGGGCTCTGGGAGCTGGGAGAGGTGAATCAGAGGGTGAGCTCC TGCCCCTGTGTGGAGACCGTCCAGGGCTCCTTGCTGATACCGGTCCATGTGGAACGCGAAGTCCAGCTTC GAGGCAGGAACCTGTGGCTTTTCCAGGATGGCCCGAGGAGCAGCGAGTGTGTGCTGGAGCTAGGGAGTCG GGAGGTGGCTGTGGAGGCTCAGGTGGAGTGTGCGCCGCCTCCAGATGTCTGGTGCCACATCAAGTGCCAG CAGCATCAGTTCAGCTATGAAGCTTTGAAGCCAGAACTGCAGGTGGGGCTGTTCCTGCGTTGGGCAGGCG GTCTGCGCGTGGACAGTGCCGATGGGCTGCATGTGGTGTTGTATGACTGCTCTGTGGGACATGGGGACTG CAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTGAGGGGGAGCGTCCGCGTTGTGTG GCCCGGGAAGCCTGTAATGAAGCCGAGACTGTGGCCACTCAGTGCCCCGCACCTCTCATTCACTCGGTGG ATCCACTGACTGGACCTATAGATGGAGGCACCCGTGTCACTATCAGGGGCTCCAACCTGGGCCAACATGT GCAGGATGTCCTGGACATGGTCAGAGTGGCCGGAGTTCCCTGCGCTGTGGATGCTGGGGAGTATGATGTC TCTAGTAGTCTTGTGTGCATCACTGGAGCCAGCGGGGAGGAGGTGACTGGCACTGTGGCAGTGGAGGTGC CTGGAAGAGGACACGGTGTCTCAGAGTTCAGCTTTGCCTATCAGGATCCAAAAGTACACTCCATCTTCCC AGCCCGTGGCCCTAGAGCTGGAGGTACCCGCCTTACCCTGCATGGTTCTAAGCTCCTGACTGGACGGCTA GAGGACATCCGTGTGGTGGTTGGAGACCAGCCTTGCCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTAC ACTGTGAGACCGGCCCATACCCTGTGCCTGCTGAACTTCCAGTGACTGTCTTGTTTGGGGCCACTGAGCG GAGGCTTCAGCACGGCCAATTCAAGTATACATCAGACCCCAATGTCACCTCAGTGGGCCCCTCCAAGAGC TTCTTCAGCGGAGGACGTGAGATATGGGTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCC GAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACGTGGTCCCTGAGAAATT TGAGGAGCCGTGTCTCGTGAACTCCTCCCACCTCCTCATGTGCCGCACTCCCGCTCTCCCTGGCCCACCC TGGGACTCTGGGGTCCAGGTGGAGTTTATCCTCGACAACATGGTCTTTGACTTTGCTGCACTGAGCCCCA CACCCTTCTCCTATGAGGCTGATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCG GCACAAGCCAGGGAGTGTGTTCTCTGTGGAGGGGGAGAATCTGGACCTCGCCATGTCTAAAGAAGAGGTG GTGGCCATGATAGGGGACGGGCCCTGCGTGGTAAAGACACTGACCCGGAACCACCTGTACTGTGAGCCCC CTGTGGAGCAGCCCCTGCCACATCCCCATGCCCTCCGAGAGGCTCCAGATGCTTTGCCTGAGTTCACGGT ACAGATGGGCAACCTGCGCTTCTCCTTGGGTCATGTGCAGTACGATGGCGAGAGCCCCGTGGCTTTTCCT GTGGCAGCCCAAGTGGGCTTGGGAGTGGGCACGTCTCTCCTGGCTCTGGGTGTCATCATCATTGTCCTCA TATACAGGAGGAAGAGCAAGCAGGCCCTGAGGGACTATAAGAAAGTGCAGATCCAGCTGGAGAACCTGGA GAGCAGTGTACGGGACCGCTGTAAGAAGGAGTTTACAGACCTCATGACGGAGATGACGGATCTCACCAGT GACCTCCTTGGCAGCGGTATCCCCTTCCTTGACTACAAAGTGTATGCTGAGAGGGTCTTCTTCCCTGGGT ACCGGGAGTCCCCCTTGCACAGGGACCTCGGTGTGCCTGACAGCAGGCGACCCACCGTGGAACAGGGCCT GGGGCAGCTCTCCAACCTGCTAAACAGCAAGCTCTTCCTTACCAAGTTCATCCACACACTGGAGAGTCAG CGCACCTTCTCTGCTCGGGACCGTGCCTACGTGGCATCTCTGCTCACTGTTGCACTTCACGGGAAGCTTG AATACTTCACGGACATACTGCGGACTCTGCTCAGTGACCTGGTAGCTCAGTATGTTGCCAAGAACCCCAA GCTGATGCTGCGCAGGACAGAGACCGTGGTAGAAAAGCTGCTCACCAACTGGATGTCCATCTGCCTCTAC ACCTTTGTGAGGGACTCTGTGGGAGAGCCTCTGTATATGCTCTTCAGAGGGATTAAGCATCAAGTGGACA AGGGTCCCGTGGACAGTGTGACTGGCAAAGCCAAATACACTCTGAATGACAACCGCCTGCTCAGAGAGGA TGTGGAGTACCGTCCCTTGACCTTGAATGCTCTTCTGGCTGTGGGGCCTGGGGCAGGAGAAGCCCAGTGT GTACCTGTGAAAGTCCTGGACTGTGACACCATCTCCCAGGCCAAGGAGAAGATGCTAGACCAGCTTTACA AGGGAGTGCCTCTTGCCCAGCGGCCCGACTCTTGCACCTTGGATGTTGAATGGCGGTCTGGAGTGGCTGG GCACCTTATCCTTTCTGATGAGGACGTCACTTCCGAACTCCAGGGTCTGTGGAGGCGTCTGAATACACTG CAACATTACAAGGTCCCAGATGGAGCAACGGTGGCCCTTGTCCCCTGCCTCACCAAGCATATTCTTAGGG AAAACCAGGATTATGTCCCTGGGGAACGGACCCCAATGCTGGAGGATGTAGATGAGGGGGGCATCCGGCC CTGGCACCTGGTAAAGCCGAGTGATGAACCAGAGCCTCCCAGGCCGAGGAGGGGCAGCCTTCGGGGTGGG GAGCGTGAGCGAGCCAAGGCTATCCCTGAGATCTACCTGACACGCCTGCTATCCATGAAGGGCACACTGC AGAAGTTTGTGGATGACCTGTTCCAGGTGATTCTCAGCACCAGCCGCCCTGTGCCTCTGGCTGTGAAGTA CTTCTTTGACTTGCTGGATGAACAAGCTCAGCAGCATGGCATCTCTGATCAGGATACTATCCACATCTGG AAGACCAACAGCCTGCCGCTAAGGTTCTGGATCAACATCATCAAGAACCCACAGTTTGTGTTCGATGTGC AGACTTCGGATAACATGGATGCTGTGCTCCTGGTCATTGCACAGACCTTCATGGATGCTTGCACCCTGGC CGACCACAAGCTGGGCCGGGATTCTCCCATCAACAAACTTCTGTATGCTCGAGATATTCCCCGTTACAAA CAGATGGTGGAAAGGTACTATGCAGACATCAGACAGACTGTCCCGGCCAGTGACCAAGAGATGAACTCAG TCTTGGCGGAGCTGTCCCGGAACTGCTCTGCCGACCTTGGGGCGCGAGTGGCTCTGCATGAACTCTACAA GTATATCAACAAGTACTATGACCAGATCATCACTGCCCTGGAGGAGGATGGCACTGCCCAGAAGATGCAG CTGGGCTACCGGCTCCAGCAGATCGCCGCTGCTGTGGAAAACAAGGTCACGGATCTATAA
Translation (2119 aa): MSVLGPVLLQVFWAGCVVTLRSPLPAAFTANGTHLQHLARDPTTGTLYVGATNFLFQLSPGLQLEAVVST GPVNDSRDCLPPVIPDECPQAQPTNNPNQLLLVSPEALVVCGSVHQGICELRSLGQIRQLLLRPERPGDT QYVAANDPAVSTVGLVAQGLVGEPLLFVGRGYTSRGVGGGIPPITTRALRPPDPQAAFSYEETAKLAVGR LSEYSHHFVSAFVRGASAYFLFLRRDLKAPSRAFRAYVSRVCLQDQHYYSYVELPLACQGGRYGLIQAAA VATSKEVARGDVLFAAFSSVAPPTVDWPLSASTGASGTSVLCAFPLDEVDQLANYTRDACYTREGRAENG TKVADIAYDVLSDCAQLPVDTPDAFPCGSDHTPSPMVSCVPLEATPILELPGVQLTAVAVTMEDGHTIAF LGDSQGQLHRVYLGPGRSAAPYSKQSIQPGSPVNRDLTFDGTFEHLYVATQTTLVKVPVAPCAQHLDCDS CLAHRDPYCGWCVLLGRCSRRSECSRDQGPEQWLWSFQPELGCLRVVAVSPANISREERREVFLSVPGLP SLWPGESYFCYFGDQQSPALLTSSGVMCPSPDPSEAPVLQRGADHISVNVELRFGAVVIASTSLSFYDCV AVTASSPSAPCRACVSSRWGCNWCVWQQLCTHKASCDAGPMVASQQSPLLPLIPPARDELTPFPPTVPQT TVTPTPNSFPIEPRAPSTASDVLPGAKPSRLSLWGPWAGPGPILSPTSTESPLHEKPLPPDPPTIPGTTV PAPTGLGPSTTPEDLLASYPFPSDAAAVSPAEPGPEALPSMVALDQPPGTVPDTTFPGAPGSMKPVLDWL TKGGGELPEADEWMGGDTPAFSTSTLLSGDGDSAEHEGPPAPLILLSSLDYQYDTPGLWELGEVNQRVSS CPCVETVQGSLLIPVHVEREVQLRGRNLWLFQDGPRSSECVLELGSREVAVEAQVECAPPPDVWCHIKCQ QHQFSYEALKPELQVGLFLRWAGGLRVDSADGLHVVLYDCSVGHGDCSRCQTAMPQYDCVWCEGERPRCV AREACNEAETVATQCPAPLIHSVDPLTGPIDGGTRVTIRGSNLGQHVQDVLDMVRVAGVPCAVDAGEYDV SSSLVCITGASGEEVTGTVAVEVPGRGHGVSEFSFAYQDPKVHSIFPARGPRAGGTRLTLHGSKLLTGRL EDIRVVVGDQPCHLLLEQQSEQLHCETGPYPVPAELPVTVLFGATERRLQHGQFKYTSDPNVTSVGPSKS FFSGGREIWVRGQDLDVVQRPRIRVTVVPRQHGQGLAQKQHVVPEKFEEPCLVNSSHLLMCRTPALPGPP WDSGVQVEFILDNMVFDFAALSPTPFSYEADPTLRSLNPEDPSTPFRHKPGSVFSVEGENLDLAMSKEEV VAMIGDGPCVVKTLTRNHLYCEPPVEQPLPHPHALREAPDALPEFTVQMGNLRFSLGHVQYDGESPVAFP VAAQVGLGVGTSLLALGVIIIVLIYRRKSKQALRDYKKVQIQLENLESSVRDRCKKEFTDLMTEMTDLTS DLLGSGIPFLDYKVYAERVFFPGYRESPLHRDLGVPDSRRPTVEQGLGQLSNLLNSKLFLTKFIHTLESQ RTFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLY TFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAVGPGAGEAQC VPVKVLDCDTISQAKEKMLDQLYKGVPLAQRPDSCTLDVEWRSGVAGHLILSDEDVTSELQGLWRRLNTL QHYKVPDGATVALVPCLTKHILRENQDYVPGERTPMLEDVDEGGIRPWHLVKPSDEPEPPRPRRGSLRGG ERERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPLAVKYFFDLLDEQAQQHGISDQDTIHIW KTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADHKLGRDSPINKLLYARDIPRYK QMVERYYADIRQTVPASDQEMNSVLAELSRNCSADLGARVALHELYKYINKYYDQIITALEEDGTAQKMQ LGYRLQQIAAAVENKVTDL
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