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Report for CCDS34451.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34451.1 Public Homo sapiens 6 BICRAL 24 110 108 CCDS HistoryNCBI Gene:23506Re-query CCDS DB by CCDS ID:34451.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34451.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314073.10 ENSP00000313933.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314073.10Link to Ensembl Protein Viewer:ENSP00000313933.4Re-query CCDS DB by Nucleotide ID:ENST00000314073Re-query CCDS DB by Protein ID:ENSP00000313933
Original member Current member EBI ENST00000394168.1 ENSP00000377723.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394168.1Link to Ensembl Protein Viewer:ENSP00000377723.1Re-query CCDS DB by Nucleotide ID:ENST00000394168Re-query CCDS DB by Protein ID:ENSP00000377723
Original member Current member EBI ENST00000614467.4 ENSP00000482211.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614467.4Link to Ensembl Protein Viewer:ENSP00000482211.1Re-query CCDS DB by Nucleotide ID:ENST00000614467Re-query CCDS DB by Protein ID:ENSP00000482211
Original member Current member NCBI NM_001318819.2 NP_001305748.1 Accepted alive Link to Nucleotide Sequence:NM_001318819.2Link to Protein Sequence:NP_001305748.1Re-query CCDS DB by Nucleotide ID:NM_001318819Re-query CCDS DB by Protein ID:NP_001305748Link to BLAST:NP_001305748.1
Original member Current member NCBI NM_001393499.1 NP_001380428.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393499.1Link to Protein Sequence:NP_001380428.1Re-query CCDS DB by Nucleotide ID:NM_001393499Re-query CCDS DB by Protein ID:NP_001380428Link to BLAST:NP_001380428.1
Original member Current member NCBI NM_015349.3 NP_056164.1 Accepted alive Link to Nucleotide Sequence:NM_015349.3Link to Protein Sequence:NP_056164.1Re-query CCDS DB by Nucleotide ID:NM_015349Re-query CCDS DB by Protein ID:NP_056164Link to BLAST:NP_056164.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305748.1 1079 Q6AI39 1079 100% 0 0
NP_001380428.1 1079 Q6AI39 1079 100% 0 0
NP_056164.1 1079 Q6AI39 1079 100% 0 0

Chromosomal Locations for CCDS 34451.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 42822023 42822063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42822796 42822844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42822935 42823003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42828493 42830172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42852092 42852197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42853638 42853738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42855856 42855917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42857091 42857236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42860262 42860356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42862510 42862612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42864659 42865446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3240 nt):
ATGGATGATGATGATGACTCGTGTCTCCTTGATCTTATTGGAGACCCACAAGCATTGAACTATTTTCTAC
ATGGACCTAGTAATAAATCTAGCAATGATGACTTGACTAATGCAGGATATTCTGCAGCCAATTCAAATTC
AATTTTCGCCAACTCTAGTAATGCTGATCCTAAGTCATCCCTCAAAGGTGTAAGCAACCAGCTTGGAGAA
GGGCCCAGTGATGGACTGCCACTTTCAAGTAGCCTCCAGTTTCTTGAAGATGAACTCGAGTCTTCTCCTC
TTCCTGATCTCACTGAGGACCAACCTTTCGACATTCTTCAGAAATCCTTGCAAGAGGCCAATATCACTGA
ACAGACATTGGCAGAAGAGGCATATTTGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCACAAGCTCAG
CTTCATCCTTCTTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTCTAATTACTCAGGTCAGACGCTGC
AGCCTATAGGGGTGACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAACATGG
CTTTATGCAACATGTGGGGATCAGTGTTCCCAGCCAGCATTTGTCTAATAGCAGTCAGATTAGTGGTTCT
GGTCAAATACAGTTAATTGGGTCATTTGGTAATCATCCTTCCATGATGACTATTAATAACCTAGATGGAT
CTCAAATCATATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGGCTCCTGGTTCATAG
ACAGACTCCTAATGGCAACTCCTTGTTTGGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTT
CCATTTAACAGCACAAATTTTCAAACATCTTTACCTGTGCATAACATCATCATACAAAGGGGTCTTGCAC
CAAATTCAAATAAAGTCCCAATTAATATACAGCCAAAGCCTATCCAGATGGGTCAGCAAAATACATACAA
TGTGAACAATTTGGGAATTCAGCAGCACCACGTACAACAAGGGATCTCTTTTGCTTCTGCAAGCTCACCC
CAGGGCTCAGTAGTTGGTCCACACATGTCTGTGAACATTGTAAACCAACAGAACACAAGAAAGCCAGTCA
CCTCACAGGCAGTGAGCAGCACTGGGGGCAGTATTGTTATTCATTCCCCCATGGGCCAACCTCACGCACC
CCAAAGTCAGTTCCTTATACCTACAAGCCTTTCTGTCAGTTCCAACTCGGTACACCACGTCCAGACTATA
AATGGGCAACTTCTTCAAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGGCCTCAGAGCATGTCATGT
TGAACAGAAACTCTTCCAACATGCTCAGGACCAACCAACCATATACTGGACCGATGCTTAACAACCAGAA
TACTGCTGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTCTGGAAGTCCAGTGATAGCCAATCATGCC
TCTCCTCAGCTTGTGGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGTATTACACCTGTCACCTG
GGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTCGCCACCATGCCATCGGTGACAAGCATGTCAGGACC
TAGTCGGTTCCCTGCTGTCAGCTCAGCCAGCACTGCCCATCCTAGTCTTGGGTCTGCAGTTCAGTCTGGT
TCATCAGGATCAAACTTTACAGGAGATCAGCTGACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTGT
CTCATCGTCTTCCAGTTTCTTCTTCCAAGTCTACCAGCACCTTCAGTAACACACCTGGAACAGGAACCCA
GCAACAATTCTTCTGCCAGGCTCAGAAAAAATGTCTGAATCAGACTTCCCCCATTTCTGCTCCCAAGACC
ACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGGATTCTGGAA
GCAAAGTTATATCCGCATCCTTAGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGGATCATCTCCTGG
CCATCCAGCTGTGCAGGTGGAGAGTCATTCGGGAGGACAAAAAAGGCCTGCTGCGAAACAGCTAACGAAA
GGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACACCAGACAAAAGTCACTTCC
GATCACTAAGTGATGCGGTACAGAGACTGCTCTCCTACCACGTGTGCCAGGGCTCCATGCCCACTGAAGA
AGACTTGAGAAAAGTGGACAATGAATTTGAGACAGTTGCCACTCAGCTCCTAAAAAGGACCCAAGCTATG
CTTAACAAATACAGATGCCTGCTCCTAGAAGATGCCATGCGAATCAATCCCTCTGCTGAGATGGTGATGA
TCGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCCCGAGACAAGCGTTTGGCACTTGTAGACCC
TGAGGGTTTTCAGGCTGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTGCTCATGAGACACAGTTTGGC
CGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACC
GAGCCAAAACCGGTGTGACGGAACCCATGAATCATGACCAGTTTCATCTAGTGCCTAATCACATCGTGGT
CTCTGCAGAAGGAAACATTTCTAAAAAAACAGAATGCCTTGGCAGAGCACTGAAATTTGACAAAGTGGGC
TTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTCAGTGCT
CTCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAG
CATCCTAGCAGATTCGCACTTGGAGATGACGTGTAACAATTCCTTCCAGGACAAAAGTCTGAGGAATTCT
CCAAAGAATGAAGTTTTACACACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCTGA
CAAAGAGCTTGGAAACCACATTTAAGAACATCTTGGAACTCAAAAAGGCGGGACGGCAGCCCCAGAGTGA
CCCCACGGTTAGCGGCTCTGTTGAGTTAGATTTCCCCAACTTTTCTCCTATGGCTTCACAGGAAAACTGC
CTGGAAAAGTTCATCCCGGACCACAGTGAAGGTGTTGTAGAAACTGACTCCATTTTAGAAGCAGCTGTAA
ATAGTATCCTAGAGTGTTAA

Translation (1079 aa):
MDDDDDSCLLDLIGDPQALNYFLHGPSNKSSNDDLTNAGYSAANSNSIFANSSNADPKSSLKGVSNQLGE
GPSDGLPLSSSLQFLEDELESSPLPDLTEDQPFDILQKSLQEANITEQTLAEEAYLDASIGSSQQFAQAQ
LHPSSSASFTQASNVSNYSGQTLQPIGVTHVPVGASFASNTVGVQHGFMQHVGISVPSQHLSNSSQISGS
GQIQLIGSFGNHPSMMTINNLDGSQIILKGSGQQAPSNVSGGLLVHRQTPNGNSLFGNSSSSPVAQPVTV
PFNSTNFQTSLPVHNIIIQRGLAPNSNKVPINIQPKPIQMGQQNTYNVNNLGIQQHHVQQGISFASASSP
QGSVVGPHMSVNIVNQQNTRKPVTSQAVSSTGGSIVIHSPMGQPHAPQSQFLIPTSLSVSSNSVHHVQTI
NGQLLQTQPSQLISGQVASEHVMLNRNSSNMLRTNQPYTGPMLNNQNTAVHLVSGQTFAASGSPVIANHA
SPQLVGGQMPLQQASPTVLHLSPGQSSVSQGRPGFATMPSVTSMSGPSRFPAVSSASTAHPSLGSAVQSG
SSGSNFTGDQLTQPNRTPVPVSVSHRLPVSSSKSTSTFSNTPGTGTQQQFFCQAQKKCLNQTSPISAPKT
TDGLRQAQIPGLLSTTLPGQDSGSKVISASLGTAQPQQEKVVGSSPGHPAVQVESHSGGQKRPAAKQLTK
GAFILQQLQRDQAHTVTPDKSHFRSLSDAVQRLLSYHVCQGSMPTEEDLRKVDNEFETVATQLLKRTQAM
LNKYRCLLLEDAMRINPSAEMVMIDRMFNQEERASLSRDKRLALVDPEGFQADFCCSFKLDKAAHETQFG
RSDQHGSKASSSLQPPAKAQGRDRAKTGVTEPMNHDQFHLVPNHIVVSAEGNISKKTECLGRALKFDKVG
LVQYQSTSEEKASRREPLKASQCSPGPEGHRKTSSRSDHGTESKLSSILADSHLEMTCNNSFQDKSLRNS
PKNEVLHTDIMKGSGEPQPDLQLTKSLETTFKNILELKKAGRQPQSDPTVSGSVELDFPNFSPMASQENC
LEKFIPDHSEGVVETDSILEAAVNSILEC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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