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Report for CCDS3395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3395.1 Public Homo sapiens 4 CFAP184 24 110 108 CCDS HistoryNCBI Gene:257236Re-query CCDS DB by CCDS ID:3395.1Re-query CCDS DB by GeneID:257236See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310085.6 ENSP00000309285.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310085.6Link to Ensembl Protein Viewer:ENSP00000309285.4Re-query CCDS DB by Nucleotide ID:ENST00000310085Re-query CCDS DB by Protein ID:ENSP00000309285
Original member Current member NCBI NM_153376.3 NP_699207.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153376.3Link to Protein Sequence:NP_699207.1Re-query CCDS DB by Nucleotide ID:NM_153376Re-query CCDS DB by Protein ID:NP_699207Link to BLAST:NP_699207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699207.1 555 Q2M329 555 100% 0 0

Chromosomal Locations for CCDS 3395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 7041271 7042938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGACGTCAGCTCTGAGCACACTAAGGACCCCGGCGGGGAAGGCGGAGACGGGGAAAGCCTGGCCGCGC
GGCCGTCCAAGATCAAGGCCAGCTCTGGCCCTCCGACCTCTCCCGAACCCGGGGAGCTGGAGTCGGAGCC
GGAGGAGGAGGAGGAGGAGCAAGCGGCTTCGCAGGGAGGCACCGCCGCGGACGAGCAGGCCGAGGCCCCG
AAAGGGCTAACGGCAGCCGAGGCTGCGGGCGAGGAGGGGCCTGGAGAGCCGGGGAGGCCGGCCGAGCCCC
AGCCCGAGCCCGAAGAGCCGGCCGAGGTTGGGGCTGAGGAGCCCGCCCAGCCGGAGCCCGGAGCCGGGCC
CGAGGAACTAGAGGCGGAGGCGGGGGCGGAGGAACTGGAGCAGGCGGCAGAGGGGAAGGAAGTCAGGTTC
CAGGCCTCTCTGCCGCTGACCAGGATCGATGAGGAAGAGGCTGCTGCAGCCCCGGAGGCCGAGACAGAGC
GGGTGGAGGGGGAGGAAGAGGACAAGGAGGAGACGCAGAGAGACGGCGCGGAGAGCAAGGAGAGGGATGG
GGAAGGACGCCCGGCCAAAAGCCAGGAAGAGGGGAAGCGCCTCTATGGAAGGGACGAGTTTGAGGACCTC
GAGTGGTCCGAGGAGGTCCAGAAGCTGCAGGAGCAGCAGCTGCGCAGCGACCTCCTGGACCAGTACCGTT
CCCTGCTGGTGGAGCGGAACCGCTCCCAGCGCTACAACCTATACCTGCAGCACAAGATCTTCGAGGCGCT
GCGCAGAAAGAAGGGCCTGGAGGCCGCTGAGGTGGCTGACCGGGGCGCAGAGGCCGAGGCCCCCGAGAAA
GAGCAAGCGTACCTGCGCCATCTGGGCATGCTGGAGGAGCTGAAGAAGCAGCAGGCAGACGACCTGCAGT
GGTACCACCAGGAGCTGGGCCAGTTGAAGCGGCAGTGCCAGGAGAAGCTCACCAGGGTGGAGAAGGAGTG
GCGACGCTTCCAGGCACTCAAGAAGCAGGTGGTGATGCAGGCCATGGGCAGCTGTCGGATGAGGGGCGGG
CGCCAGGCTGCTCTGCGAGAGGTGGAGCAGATCCAGGCGTTGGAGGATAAAAAGGAGAAGGAGATGAGCG
CCGTGCGGCTGGAGAACATTCAGCTGAAGCAGAGCCTGGTGCATTTTGAAACCAGGATGAGGACCCAGGA
GGACCTGACCCAGGGTCTGCTTCTTATTGACTTTGAACAGCTGAAGATTGAGAACCAAACCTTCAATGAG
AAAATTGAGGAACGAAATGAGGAACTTTTAAAACTTCGCAGCAAGGTGACCAACAGTGTGCAAGTAATAA
CCCACGTGAAGGAAAAGCTGCACTTCATGGACATGGAGAACGCGTGCAAAAAGACACAGCTGGCAGAAAT
CGAGGCCCAGGCCGCCCTAGGAAGAGACATCCTGACCAAGACGAAGCAAGCCCGAGAGGGGCTGCGGACG
GACAACATCAGACTGAATCAGAAGTGCGGCCTTCTAGGCAAGGACTCACTTCTTCGGGACTTGGAAGAAA
AGGTGGACAAGACCGAACTGCTTCACCGGCGCCTGGAATCCCTGAAGCGCCACCACGCTAGCCTCACTTT
GTCCTGCAGAGGCGTGAGGCAGAAGATCAGGGAGGCCAAAGCCTTTCTCCCTTCTTGA

Translation (555 aa):
MDVSSEHTKDPGGEGGDGESLAARPSKIKASSGPPTSPEPGELESEPEEEEEEQAASQGGTAADEQAEAP
KGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVRF
QASLPLTRIDEEEAAAAPEAETERVEGEEEDKEETQRDGAESKERDGEGRPAKSQEEGKRLYGRDEFEDL
EWSEEVQKLQEQQLRSDLLDQYRSLLVERNRSQRYNLYLQHKIFEALRRKKGLEAAEVADRGAEAEAPEK
EQAYLRHLGMLEELKKQQADDLQWYHQELGQLKRQCQEKLTRVEKEWRRFQALKKQVVMQAMGSCRMRGG
RQAALREVEQIQALEDKKEKEMSAVRLENIQLKQSLVHFETRMRTQEDLTQGLLLIDFEQLKIENQTFNE
KIEERNEELLKLRSKVTNSVQVITHVKEKLHFMDMENACKKTQLAEIEAQAALGRDILTKTKQAREGLRT
DNIRLNQKCGLLGKDSLLRDLEEKVDKTELLHRRLESLKRHHASLTLSCRGVRQKIREAKAFLPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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