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Report for CCDS18634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18634.1 Public Mus musculus 4 Gnl2 23 108 98 CCDS HistoryNCBI Gene:230737Re-query CCDS DB by CCDS ID:18634.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18634.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030684.7 ENSMUSP00000030684.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030684.7Link to Ensembl Protein Viewer:ENSMUSP00000030684.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000030684Re-query CCDS DB by Protein ID:ENSMUSP00000030684
Original member Current member NCBI NM_145552.2 NP_663527.2 Accepted alive Link to Nucleotide Sequence:NM_145552.2Link to Protein Sequence:NP_663527.2Re-query CCDS DB by Nucleotide ID:NM_145552Re-query CCDS DB by Protein ID:NP_663527Link to BLAST:NP_663527.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663527.2 728 Q99LH1 728 100% 0 0

Chromosomal Locations for CCDS 18634.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 125030131 125030194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125034238 125034322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125035215 125035309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125037522 125037661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125040937 125041121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125042614 125042680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125043565 125043723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125044224 125044337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125046246 125046374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125047503 125047607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125048347 125048505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125048680 125048793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125052404 125052855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125053455 125053534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125054142 125054227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 125055184 125055336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2187 nt):
ATGGTGAAGCCCAAGTACAAAGGACGGAGCACCATCAACCGCTCGGCGGCCAGCACCAACCCAGATCGAG
TACAGGGAGCTGGCGGCCAAAACATGAGGGATCGGGGCACAATTCGGCGCCTGAATATGTACAGGCAAAA
GGAGCGCAGGAACAGTCGTGGTAAAGTGATTAAGCCACTGCAGTATCAGTCAACTGTGGCTTCTGGCACA
GTGGCCCGAGTGGAGCCGAATATTAAATGGTTTGGAAATACTCGTGTGATCAAGCAGGCATCATTACAAA
AATTTCAAGAGGAAATGGATAAAGTTATGAAGGATCCATACAAAGTTGTCATGAAACAAAGCAAATTACC
GATGTCTCTTCTGCACGATCGAATCCAGCCTCATAACGCAAAAGTCCACATTCTTGATACTGAAAGCTTT
GAAAGTACATTTGGCCCAAAGTCACAGAGAAAGCGGCCAAACTTGTTTGCAAGTGATATGCAATCCCTTC
TAGAAAACGCTGAAATGTCTACTGAGAGCTATGACCAGGGCAAGGACCGTGATTTGGTGATGGAGGACAC
TGGTGTAAGAAATGAAGCTCAAGAAGAGATATATAAAAAAGGGCAGTCAAAAAGAATATGGGGAGAACTC
TACAAGGTGATAGACTCATCAGATGTTGTCGTTCAAGTCCTTGACGCTAGAGATCCGATGGGCACTCGTT
CCCCCCACATCGAAGCTTACTTGAAAAAGGAAAAACCCTGGAAACATCTCATTTTTGTACTCAATAAGTG
TGACCTTGTTCCAACTTGGGCAACCAAACGATGGGTTGCTGTGCTCTCCCAGGACTACCCAACACTGGCT
TTCCATGCGAGCCTCACCAATCCCTTTGGGAAGGGAGCATTCATTCAGCTTCTGCGGCAGTTTGGGAAGT
TGCACACAGACAAGAAACAAATCAGTGTTGGGTTCATTGGCTATCCAAATGTAGGCAAGAGCTCTGTGAT
TAATACATTACGATCCAAGAAAGTTTGCAACGTGGCCCCCATTGCTGGAGAAACAAAGGTCTGGCAGTAT
ATTACCTTGATGCGTCGTATATTCCTGATTGACTGCCCTGGTGTGGTTTACCCATCTGAGGACTCAGAGA
CCGACATTGTGCTCAAAGGAGTGGTTCAAGTTGAGAAAATTAAAGCTCCTCAAGACCACATTGGTGCTGT
CCTTGAACGAGCAAAGCCAGAGTATATCAGCAAGACGTACAAGATTGAGTCCTGGGAGAACGCGGAGGAC
TTTCTTGAGAAGCTAGCTCTCCGCACTGGGAAGTTACTGAAGGGTGGAGAGCCTGACATGCTGACTGTGA
GCAAGATGGTTCTCAATGACTGGCAGAGAGGCCGAATCCCTTTCTTTGTCAAGCCGCCCAATGCAGAGCT
ACCGACCGATTCCCAGCTTCCACCATCCTCACCATTGGAAGTTCCCACAGAAACAACCCAGAACAACCCA
GAAGAAGAGACCACAGAAACAGAAGTTGAAAGGTCAGACTCTATCACTGAAAAGGAGCCAGAAGGAGACT
GTTCTCAGGATAGAAACTCAGAGATGCAACAGATCCTCGCACGAGTTCGCCAGAACTTTGGCAAAATCAA
CGTGGGGCCTCAGTTTTCTGCGGATGACCTGGTGCCTGTGGAGATGTCAGACTTGGAAGATCTGGAAAGC
TCTGGGGAAGAGGAAGAACAGGAGCAGGAACAGCCAGGGGAGGATGCCGAGGAAGAGCGCTCCCCAGACA
CTCAGGAGGAACCAGTGGGAAACGACACCAAGGCCGTGCTCAGAGCCCTGGATGAGAAGATTGCCAAGTA
CCAGAGGTTTCTAAATAAAGCTAAAGCTAAAAAGTTCTCTGCCGTCAGAATATCCAAGGACTTAAGTGAA
AAGGTTTTTGCAAAATACAAAGAAGAGAAGAAAACATCTGCAGAAGACAGTGATGCAGCACCCACCAAAA
AGGCAAGGAAGTGGGATGCACAGATGGAAGAAGAACCTTCAAATAAGACTCAGAGGATGCTGACGTGTAA
GGAACGGAGGAGAGCAGCACGGCAGCAACAATCCAAAAAAGTTGGTGTGCGTTACTACGAGACACACAAT
GTGAAAAACAGGAACAGGAACAAAAAGAAGACGAGCGACTCAGAGGGACAGAAACACAGACGCAACAAGT
TCAGACAGAAGCAGTAA

Translation (728 aa):
MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRGTIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGT
VARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESF
ESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLVMEDTGVRNEAQEEIYKKGQSKRIWGEL
YKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLA
FHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQY
ITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAED
FLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAELPTDSQLPPSSPLEVPTETTQNNP
EEETTETEVERSDSITEKEPEGDCSQDRNSEMQQILARVRQNFGKINVGPQFSADDLVPVEMSDLEDLES
SGEEEEQEQEQPGEDAEEERSPDTQEEPVGNDTKAVLRALDEKIAKYQRFLNKAKAKKFSAVRISKDLSE
KVFAKYKEEKKTSAEDSDAAPTKKARKWDAQMEEEPSNKTQRMLTCKERRRAARQQQSKKVGVRYYETHN
VKNRNRNKKKTSDSEGQKHRRNKFRQKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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