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Report for CCDS15763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15763.1 Public Mus musculus 2 Lrrc26 23 108 98 CCDS HistoryNCBI Gene:227618Re-query CCDS DB by CCDS ID:15763.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15763.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028337.6 ENSMUSP00000028337.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028337.6Link to Ensembl Protein Viewer:ENSMUSP00000028337.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028337Re-query CCDS DB by Protein ID:ENSMUSP00000028337
Original member Current member NCBI NM_146117.2 NP_666229.1 Accepted alive Link to Nucleotide Sequence:NM_146117.2Link to Protein Sequence:NP_666229.1Re-query CCDS DB by Nucleotide ID:NM_146117Re-query CCDS DB by Protein ID:NP_666229Link to BLAST:NP_666229.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666229.1 331 Q91W20 331 100% 0 0

Chromosomal Locations for CCDS 15763.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25289989 25290661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25290738 25291060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGCGGGGTTCTTTTTTCTCGCGGCTTCCGCCGCAACTCTCTCTGCTGCTGCTGCTGTCGTTGAGGCGAG
TCTGGACCCAGGAGGATATTGGAACTGCCCCTTCTAAATCCCCGGTGGCCCCCGAATGCCCCGAGGCATG
TTCATGTTCACTAGGCGGCAAGGCCAATTGCTCCGCACTCGCGCTGCCTGCGGTACCAGCGGACCTGAGC
TGGCAAGTACGCTCACTGCTGCTGGATCACAATCGCGTGAGCGCGCTGCCTCCGGGTGCCTTCGCCAATG
CAGGCGCGCTGCTATACCTAGATCTGAGGGAGAACCGGCTTCGGTCGGTGCACGCACGAGCTTTCTGGGG
TCTGGGAGTGTTGCAATGGCTGGACCTGAGCTCCAACCAGCTGGAAACTCTGCCTCCTGGCACCTTCGCG
CCGCTGCGCGCGCTTAGTTTCCTCTCCCTAGCGGGTAACCGGCTGGCACTCCTGGAGCCTTCGATCCTGG
GCCCGCTTCCATTACTGCGAGTGCTCAGCCTGCAGGACAATTCACTATCGGCAATCGAGGCGGGTTTGCT
GAATAACTTGCCTGCCCTCGATGTGTTGCGCTTGCATGGCAACCCCTGGACGTGCAACTGTGCGCTGCGT
CCCCTTTGCACTTGGCTGCGTAAGCACCCGCGTCCAGCCTCAGAAACTGAGACCCTGCTCTGCGTGTCTC
CAAGACTCCAGACGCTCAGCCTACTGACAGCTTTTCCGGATGCCGCCTTCAAACAGTGCACTCAGTCACT
AGCAGCGCGAGACCTGGCGGTGGTCTACGCTCTCGGGCCGGTCTCTTTCCTTGCTAGTTTGGCCATCTGC
CTGGCATTGGGCTCCGTGCTCACTGCTTGTGGTGCACGGCGCCGCCGCCGCCGCCGCACCACGGTGCGCC
ACTTACTAAGGAGACAGCTAGACCCCGAGGGCCCACCCTCCCTGGAGGATGCTGGGAGCCCTGTAACAGC
AGCTATCCAAGCCTAA

Translation (331 aa):
MRGSFFSRLPPQLSLLLLLSLRRVWTQEDIGTAPSKSPVAPECPEACSCSLGGKANCSALALPAVPADLS
WQVRSLLLDHNRVSALPPGAFANAGALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQLETLPPGTFA
PLRALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPALDVLRLHGNPWTCNCALR
PLCTWLRKHPRPASETETLLCVSPRLQTLSLLTAFPDAAFKQCTQSLAARDLAVVYALGPVSFLASLAIC
LALGSVLTACGARRRRRRRTTVRHLLRRQLDPEGPPSLEDAGSPVTAAIQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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